Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0045 ATGGACTACAGCTCTGAAGACGACTCAGATATCAGCGAATCTGAGATCGAAGACTATGCACAGAAACCATATGAACAAATAAAGGCTGGGAAGTACAAGGTTAAAAGTCTGAATGGCTCTCTTAGATGCCCTTTCTGTGCTGGGAAGAAGAAGCAAGACTACAAATATAAAGAGTTATATCAACATGCATCAGGAGTCGGTAAGGGTTCTGCTAACAGAAGTGCAAAACAAAAGGCAAATCACCTTGCCCTAGCAAAGTATATGGAGATTGACCTAGCCAGTGAAACAGAGCAAATCCAAGCCCTGGATCATTTACCCCAATCTGTCAATCAGCCTCTGCCGCAAGATGAACTTTATGTCTGGCCCTGGATGGGCATTATTGTTAACGTAGTGAGTAAATCAGATGATTCTAATTATTGGTTGAAGGAATTTGCTAGATTCAAACCGGTAGATGCTCATATCGTATTGAGCATGGGAGTTCCGATTTCTCAAGCTGTAATGCACTTTAATAATGATTGGAATGGCTTCATGAATGCCAGTGAATTTGAGAAATCATTTGAAACTACACATCATGGTAAAAAGGATTGGAACTCAAGGAAGTTGCAGGCAGGCTCAAATGTTTATGGATGGGTAGCACGTAAAGAGGACTATGAATGTGAAGGACCAATGGGGGAATACCTCCGTGAAAAAGGAAAGTTGAGGACAGTTACTGCTATTGTTCAAGAAGCATCTGAAAGCAGAAACAGTATTGTGGCAAACCTTGCAATACAAATTGATGAGACGAATGAAAACCTCAACAAGATGCAGTACAAGTACAATGAAAAGAATATGTCCTTGAGTAGGATGCTTGAAGACAAAGACAGGCTTCACAGTGCTTTTGTTGAAGAATCAAGGAATATGCAGCGCAGAGCTCGTGATGAGGTGCGGAGGATCTTGGAAGAACAAGAAAATTTAAGCAGTGAATTGGAGGAAAAAAAGCGGAAACTTGATTCCTGGAGCCGAGATCTGAACAAACGGGAGGTACTAACTGATCAAGAGAGGCAGAAACTTGAAGAGGACAGGAAAAAGAAAGATTTGAGGAATGAGTCACTCCAGTTGGCTTCAAAAGAACAAAAGATAGCTGATGAGAATGTCCTAAAGCTTGTTGAGGAGCAAAAGAGAGAGAAAGAGGAAGCTTTGCAAAAGATTATTCAGTTGGAAAAACAGCTAGACGCCAAACAGAAATTGGAAATGGAAATTGAAGAGTTAAAAGGGAAACTGCAAGTTATGAAGCATCTCGGAGATGAAGATGATGCGGCAGTCCAGAATAAAATGAAAGAAATGAATGATGAACTGCTAGATAAACAGGACAACTTAGAAAATATGGAGCTCATGAACAATACCCTCATTACCAAGGAGCGTGAGAGCAATGATGAACTACAGAAAGCTCGTAAAGAATTGATAGCGGGGCTGAGCGAATTGCTGAATGGTCCTCGAACTAACATTGGGCTTAAGAGAATGGGAGAGCTTGATAATAAGGTCTTTGTAGATGCCTGCAAGAAAAGATTTCCTCTTGAAGAAGCCGGAACAAAGGGTGCAGAGCTTTGCTCTTTGTGGCAGGAGAATGTGAAGAATTCAGCCTGGCATCCATTTAAAGTGCGCAAAGTGGATGATGAACTAAAGGAAATTATAGATGAGGGAGATGAGAAGTTGCATGGTCTCAAGCAGGAATGGGGAGATGAGATATATTCAACCGTTGTTACAGCCTTGAAAGAATTAAAGGAATACAATCCAAGTGGTGGGTATACTGTTAATGAGCTATGGAACTTCAAGGAAAAAAGGAAGGCTACATTGAAAGAGGTTATCAGTTATATCGTGGAGCATATCAGGCCACTTAAACGCAGGAGAACATAA 1893 0.4094 MDYSSEDDSDISESEIEDYAQKPYEQIKAGKYKVKSLNGSLRCPFCAGKKKQDYKYKELYQHASGVGKGSANRSAKQKANHLALAKYMEIDLASETEQIQALDHLPQSVNQPLPQDELYVWPWMGIIVNVVSKSDDSNYWLKEFARFKPVDAHIVLSMGVPISQAVMHFNNDWNGFMNASEFEKSFETTHHGKKDWNSRKLQAGSNVYGWVARKEDYECEGPMGEYLREKGKLRTVTAIVQEASESRNSIVANLAIQIDETNENLNKMQYKYNEKNMSLSRMLEDKDRLHSAFVEESRNMQRRARDEVRRILEEQENLSSELEEKKRKLDSWSRDLNKREVLTDQERQKLEEDRKKKDLRNESLQLASKEQKIADENVLKLVEEQKREKEEALQKIIQLEKQLDAKQKLEMEIEELKGKLQVMKHLGDEDDAAVQNKMKEMNDELLDKQDNLENMELMNNTLITKERESNDELQKARKELIAGLSELLNGPRTNIGLKRMGELDNKVFVDACKKRFPLEEAGTKGAELCSLWQENVKNSAWHPFKVRKVDDELKEIIDEGDEKLHGLKQEWGDEIYSTVVTALKELKEYNPSGGYTVNELWNFKEKRKATLKEVISYIVEHIRPLKRRRT 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0045 630 Pfam XS zinc finger domain 43 85 IPR005381 GO:0031047
Lal18g0045 630 Coils Coil 379 426 - -
Lal18g0045 630 Pfam XH domain 498 628 IPR005379 -
Lal18g0045 630 PANTHER RIBONUCLEASE P SUBUNIT P38 4 630 IPR045177 GO:0080188
Lal18g0045 630 CDD RRM_like_XS 119 217 IPR005380 GO:0031047
Lal18g0045 630 Coils Coil 435 479 - -
Lal18g0045 630 Coils Coil 251 271 - -
Lal18g0045 630 Pfam XS domain 116 218 IPR005380 GO:0031047
Lal18g0045 630 Gene3D XS domain 113 273 IPR038588 -
Lal18g0045 630 Coils Coil 294 335 - -
Lal18g0045 630 Coils Coil 342 367 - -
Lal18g0045 630 PANTHER FACTOR OF DNA METHYLATION 1-RELATED 4 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0045 Lal-Chr18 324305 330107 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0045 - - gmx:100798940 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1247 20 17000156 17008014 Lal18g0045 18 324305 330107 LSH