Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0038 ATGTCGGGTCCACCCAGAGTTCGATCCATGAATGTAGCCATCCGAGAAGCTGAGAAGAAACCAGTGAAGAAATCGGTTCTAGAAACAGAGAAGAAGCCAATGACACTGCCTTCGATTTTGAAGCAGCAAGATAATCATCATAACCAAGCTGTGCTGAAAAACATGTCCATGAATGCTTCATGCTCCTCCGATGCGTCGTCCACTGATTCTTCCACTCATAGTGGTGCGAAGGTGGTGGCGCGGCGGCAGAGGTTGAGGAAGAAGGTTGAGAAAGTGAGGATTGACAATGTGGATGGTACTGATAGTGTTGATGAGACTGATTCAAATGATAGCTTGCAGAACAAGAAAAGGTGTGCTTGGGTTACACCAAATACAGAACCATGTTATGTGGCTTTTCATGATGAAGAGTGGGGAGTTCCTGTTCATGATGACAAGAAACTGTTCGAGTTGCTGTGCTTCTCTGGAGCCTTGGCCGAACTTGCATGGCCCACCATTCTCGGAAAAAGGCAGTTATTCAGGGAAGTATTTTTGGATTTTGATCCGTGTGCTGTTTCAAGAATGAATGAGAGAAAGGTAACAGCACCAGGAAGCCCTGCCAACTCATTGCTTTCAGATCTCAGGCTGCGATCAATAATTGAAAATGCACGTCAGTTGTGTAAGGTAATGGAAGAGTTTGGTTCCTTTGACACATACATTTGGAACTTTGTGAGCCATAAGCCTATAGTGAGCCAGTTCCGGTACCCACGGCAAGTACCGGTCAAATCTCCGAAAGCAGAATTCATTAGTAAAGACCTAGTAAAGAGAGGATTCAGGAGTGTGGGGCCAACAGTGATATATACATTCATGCAAGTGGCTGGTCTAACTAATGACCACCTTATCAGTTGCTTCAGATTCAAGGAATGCAGCACCGCGAACGCAGAAGCAGTGGCGAAAGAGATAGAGAAAGCAAGTGAGGAGGAGCCATCAGAAGAAGGTGGCCTATTGCTAGCTGTGAACAAATTGAGCTTCACCTCAAAGTAG 1020 0.4559 MSGPPRVRSMNVAIREAEKKPVKKSVLETEKKPMTLPSILKQQDNHHNQAVLKNMSMNASCSSDASSTDSSTHSGAKVVARRQRLRKKVEKVRIDNVDGTDSVDETDSNDSLQNKKRCAWVTPNTEPCYVAFHDEEWGVPVHDDKKLFELLCFSGALAELAWPTILGKRQLFREVFLDFDPCAVSRMNERKVTAPGSPANSLLSDLRLRSIIENARQLCKVMEEFGSFDTYIWNFVSHKPIVSQFRYPRQVPVKSPKAEFISKDLVKRGFRSVGPTVIYTFMQVAGLTNDHLISCFRFKECSTANAEAVAKEIEKASEEEPSEEGGLLLAVNKLSFTSK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0038 339 MobiDBLite consensus disorder prediction 59 83 - -
Lal18g0038 339 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE I 1 338 - -
Lal18g0038 339 MobiDBLite consensus disorder prediction 59 77 - -
Lal18g0038 339 SUPERFAMILY DNA-glycosylase 116 301 IPR011257 GO:0003824|GO:0006281
Lal18g0038 339 MobiDBLite consensus disorder prediction 1 31 - -
Lal18g0038 339 Coils Coil 299 319 - -
Lal18g0038 339 Gene3D Hypothetical protein; domain 2 115 298 - -
Lal18g0038 339 MobiDBLite consensus disorder prediction 12 30 - -
Lal18g0038 339 Pfam Methyladenine glycosylase 124 297 IPR005019 GO:0006284|GO:0008725
Lal18g0038 339 PANTHER OS04G0501200 PROTEIN 1 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0038 Lal-Chr18 261826 268642 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0038 K01246 - gmx:100805836 451.055