Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0013 ATGTCACATCGAGAAATGGTGTACGTTCAGCAGTGTAAGGACGCTAATGGCTTCGACAAGATCATTCTTAGAGAACTTCGTGGCTTCTCTGCTGAGGTGTATCTATATGGAGGTCAGGTTATGTCATGGAAGAATGAACTTGGCGAAGAGTTGCTCTTTGTCAGTAGTAAGGCTAATTTTAAGCATCCAAAATCTATACGCGGAGGTATTCCGATATGCTTTCCTCAGTTTTCAAATCTTGGCTCTCTTGAACATCATGGATTTGCAAGGAACAAGTTTTGGACCTTAGATCCTAATCCCCCACCTCCTACAACTAGCACCAGCAGGGCTTTCATTGATCTGATTCTTAAGAACTCTGAAGATGATACAAAGAGTTGGCCTCACAGATATGAGTTTCGCCTGAGAATAGCTTTGGGACCTACCGGAGATTTGATGTTGACATCCCGCATTCGAAATACAAATACAGATGGGAAATCCTTTACCTTCACATTTGCCTATCATACATACTTCTATGTTACTGACGTCAGACACTATCAATCAACTCAATTTTCTGTTGAAACTCTCAGTAAATACATGATTGCATCATTGCATTGCTCTATGATTTTTATTTGTTCTGTTTGCAAGCTAACTGTTTCACTGCTTACGTTCAGTGAAGTGCGAATAGAAGGACTAGAGACACTTGATTACCTGGACAACTTGAAGAATAAAGAGCGATTCACTGAACAAGGGGATGCTATAACATTTGAGTCTGAGGTCGACAAAGTATACCTTAGTACACCCACAAAAATTGCTATCATAGACCATGAAAGGAAGAGAACTTTTGTATTGCGGAAAGATGGGCTTCCTGATGCTGTGGTATGGAATCCATGGGACAAGAAAGCAAAGACCATATCTGATTTCGGCGATGATGAGTATAAACATATGCTGTGTGTCCAGGCTGCTTGTGTAGAGAAATCAATTACTCTCAAACCTGGTGAAGAGTGGAAAGGGAGACAGGAAATATCTGCAGTTCCTTCCAGTTATTTCAGCGGCCAACTCGACCCGCGTAAAGTACTTTTACATTAA 1065 0.4103 MSHREMVYVQQCKDANGFDKIILRELRGFSAEVYLYGGQVMSWKNELGEELLFVSSKANFKHPKSIRGGIPICFPQFSNLGSLEHHGFARNKFWTLDPNPPPPTTSTSRAFIDLILKNSEDDTKSWPHRYEFRLRIALGPTGDLMLTSRIRNTNTDGKSFTFTFAYHTYFYVTDVRHYQSTQFSVETLSKYMIASLHCSMIFICSVCKLTVSLLTFSEVRIEGLETLDYLDNLKNKERFTEQGDAITFESEVDKVYLSTPTKIAIIDHERKRTFVLRKDGLPDAVVWNPWDKKAKTISDFGDDEYKHMLCVQAACVEKSITLKPGEEWKGRQEISAVPSSYFSGQLDPRKVLLH 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0013 354 CDD D-hex-6-P-epi_like 28 335 IPR025532 -
Lal18g0013 354 SUPERFAMILY Galactose mutarotase-like 16 334 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lal18g0013 354 Pfam Aldose 1-epimerase 217 334 IPR008183 GO:0005975|GO:0016853
Lal18g0013 354 Pfam Aldose 1-epimerase 20 188 IPR008183 GO:0005975|GO:0016853
Lal18g0013 354 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 215 350 - -
Lal18g0013 354 PANTHER GLUCOSE-6-PHOSPHATE 1-EPIMERASE 3 178 - -
Lal18g0013 354 Gene3D - 2 337 IPR014718 GO:0030246
Lal18g0013 354 PIRSF PHexose_mutarotase 181 341 IPR025532 -
Lal18g0013 354 PIRSF PHexose_mutarotase 2 203 IPR025532 -
Lal18g0013 354 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 3 178 - -
Lal18g0013 354 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 215 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0013 Lal-Chr18 100125 104163 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0013 K01792 - gmx:100784457 540.036