Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1654 ATGGTTGAACCAACAACTTGTCTCGTTCGATCATTGTCTTCTCCCCCTGTTACTTCTATTTCTTCTTCCCTAACCCAACAACAGGTGGATCCCATGCGTGTGCTTGGAGAATCTATCTCTTTCGGGAGGTTTTTGTCAGAAAGCATGGATTGGGAGAGATGGTCAGCATTCACACACAAACGTTATGTAGAAGAAGCCGAAAAGTATTCAAAACCAGGTTCTGTTGCTGCAAAAAAGGCCTACTTTGAGGCTCACTACAAGAGAAAGGCTCAAGAGAAAGCAGCTGCATTGACAGAAGAAGCAAATGCTCAAGCTAATGATACTTCTGATTCAGAAACTCAGGAAGGAAATTGCAATGACACATCCGTTGAGAAGAAGTCAAAAGCCGACCACATTGTCATCGTGGAGCAGCCAAATAAAGATGCTGTCAATTACCAAGTTGTTGATGATACCAACCAATATGAATGTGATGTTGGACAAAGTGTTTTAGACATTTCCAATGTGGAAGGAGCAGCAGAGAACACGGCACAAACTTGTGTCGGTATAAATCTTAATGTGGAAAATCATGTCCTTGATAATTCTAACAAGGAGATCGTCATCCCTGTAGAAGAGAAGATATCTGATCCTGGCATTGCTGGTTACGAAGTTTTGCCTTTGCCGGTCAAGGGAAGAGAAGTTAATTCTTCTCCAAAGTTATCAACTAAAACTACAATGGTCAAACCTTCTCAATCTCTTAATAAAAGGAAGGATGCTGCAGCTTTACCTTCTCTGAAAAGTGGCACAATGTGTAAGAAGTCTGATAGAAGCTCATTTGAGAAGATAGGACTAACCGCACGGTCACTTCGCATGTCAATCAGTCTTCCCTCTGGTGCTGGTAAAGGGAACAAAACAGCTGTGGCGGCTGAACAACCCAGAAATGGTGTAAACAGTATTTTGAAAAGTAAGAAGTCTGACAGAAATTTATTTGAGAATGCAAGCCTAAACGCACGGTCACTCCACTTGTCAATCAATCTCCCCCCGAGCACTGGCAATGGAAACAAAATAGCTGCTGCAGCTGAACAACCCAGAAATGGCGTAAACAGTTTTTTGAAAAGTAAGAACTCTGACAGAAGCGCACATGAGAATGTAGGCCTAACTGCACGGTCACTCCACGTGTCAATCAATCTTCCCTCTGGCACCGGTAAAGGAAACAATACAGCTGCTGTGGCTGAAAAATCCAGAAAGGGTGCAAACAATGTATTGAATAGTAAGAAGGCTATTGGAGGCTCAGTTGAGATGAAGGGTCTAACTGCAAGGTCACTCAACATGTCAGCCATTCCTCTATCTTGCGAAACAAGAAAATCAGCTACAGCAGCTGTTAAACCCACACTTGGAGCAAACCACACTGCAAAAATGATGAAGGTTGTGGGAGAACCAGTTGAGAAGAGAGCAACTTCAGGATCACTCCACACGTCAATTAGTCTCCCTTCTGGTGCTGGTTTGACAAGCAAAATACCTTCCTTGTTTGAACGTAACGGAAGTGAGAAGTTTGTTTCTAGTTTGCCAAGCGTTTCAAAACGTCACCATGTGTCATCGCAGGCATTTACTAAGGCATCTCATGGTTTCTTGAATCGAGCTTTAGCAAATCCCCCTTCTCAGGGTAGAAGAGTTGTCTATGTCAGGACTGAAAGACTACTTAGTAAGTCTTTGTCTGGAGGTGTTACGGCAAATGCCAAGTTTTCCTCCATTTCTGTCGAGTGCCCAAAATCTTCTACTACTACCAAAAGCAATCCGCGATCCTTTACCACATCGTCACCTTTTAGATTCAGAAGTGAAGAAAGAGCATTAAAACGCAAAGAGTTCTTGCAGAGGATGGATGAAACTAAATGGAAGGATGAAGAGAAAGTTCATTTGCGAAGGATCCCCAAGGACAAAAACATTGGATATTCATGGAAGTCTCTGATCAGCACCAAACATGTTTTAGAAAAAGTCAACCAACCAACAAGATAA 1989 0.4253 MVEPTTCLVRSLSSPPVTSISSSLTQQQVDPMRVLGESISFGRFLSESMDWERWSAFTHKRYVEEAEKYSKPGSVAAKKAYFEAHYKRKAQEKAAALTEEANAQANDTSDSETQEGNCNDTSVEKKSKADHIVIVEQPNKDAVNYQVVDDTNQYECDVGQSVLDISNVEGAAENTAQTCVGINLNVENHVLDNSNKEIVIPVEEKISDPGIAGYEVLPLPVKGREVNSSPKLSTKTTMVKPSQSLNKRKDAAALPSLKSGTMCKKSDRSSFEKIGLTARSLRMSISLPSGAGKGNKTAVAAEQPRNGVNSILKSKKSDRNLFENASLNARSLHLSINLPPSTGNGNKIAAAAEQPRNGVNSFLKSKNSDRSAHENVGLTARSLHVSINLPSGTGKGNNTAAVAEKSRKGANNVLNSKKAIGGSVEMKGLTARSLNMSAIPLSCETRKSATAAVKPTLGANHTAKMMKVVGEPVEKRATSGSLHTSISLPSGAGLTSKIPSLFERNGSEKFVSSLPSVSKRHHVSSQAFTKASHGFLNRALANPPSQGRRVVYVRTERLLSKSLSGGVTANAKFSSISVECPKSSTTTKSNPRSFTTSSPFRFRSEERALKRKEFLQRMDETKWKDEEKVHLRRIPKDKNIGYSWKSLISTKHVLEKVNQPTR 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1654 662 Coils Coil 87 107 - -
Lal17g1654 662 MobiDBLite consensus disorder prediction 101 118 - -
Lal17g1654 662 MobiDBLite consensus disorder prediction 97 125 - -
Lal17g1654 662 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 1 300 - -
Lal17g1654 662 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 466 639 - -
Lal17g1654 662 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 309 408 - -
Lal17g1654 662 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 309 408 IPR044216 -
Lal17g1654 662 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 1 300 IPR044216 -
Lal17g1654 662 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 466 639 IPR044216 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1654 Lal-Chr17 17802836 17807456 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1654 - - lang:109328035 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1641 4 20505726 20509976 Lal17g1654 17 17802836 17807456 LSH