Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1643 ATGCACCCTGAGTTTCATGAAATTGCTACCACAGCTGATAAACTCAAACACCTTTCTTCAGAATTCAGTGCTCTCTCTGAGCCCATTGATAGAGTCAAAAAGCTATTACATTATGCATCATTGTTACCTCCATTACAAGATTCAGACCGTGTTCCTGAGAACCGTGTCGTGGGTTGCTCCACACAGGTGTGGGTAGTTTCGGAGATGGACGAGGAAGGGAGAATGAGGTTCAAAGCAGACAGTGATTCAGAGATAGGGAAAGGTTATTGTTGGTGTTTGGTTTGGATATTGGATGGTGCAGAACCAAAGGAAGTGTTGATGGTGGAGAAGGAAGATTTGAGTAACATGAATGTGGGGTTGAATATTAAGGCACACTCTAGGGTTAACACTTGGCAAAATGTGCTATTTGCCATGCAGAAAGCTACTAAGGATATGCTTTTCAACACACATCAATTTCACATTGCTATAATAATAGGTGCATGCATGTTGGTGTTAATTATTAGCTACTCTAATGTTCTGAGACTGGCCCGGAGGACTCAGGCTCTATTAGGGCAGTGGCCAAAATGGCTTGAGGTCTATTCCATCAGCCGGGTTTGCATTCTTTTAGCAAGCATCTTGGTTTCTTATATGGAGAATACCTGCATACCTGCCATTGATAAATGTTTTACTAGCAAAAAACCAAGTGAAATTATGAGGCTAATTGTCACGACATTTATTGGAGTGATTTTTGGCTTCTTTTTAGGAGTATCATTTCCAACATTGTCAATAACAAAGTTGAATCTCCCATCTGCCCTGCTTCCTTCCGTTGATCTCTCTTACATTGAAGACAAATATGCAGGTCACTATGATTGGTCTTTTATGAAGAATAATAACAGAAGCTCATCTCGGTATCAATCATCAAATGATACTTCGAAGATTTGGGTTCCATCAAATCCAAGAGGTGCAGAAAGATTACCTCCAGGCATAGTTGATGCTGAGTCTGATTTTAATTTGCGTAGATTGTGGGGTAAGCCCAGCGAGGATTTAGCTACCAAGCCGAAGTACCTTATCACCTTCACTGTTGGTTATGATCAGAGAGATAATATTGATAAAGCTGTGAAAAAGTTTTCAGAAAACTTCACAATCCTTCTCTTTCATTATGATGGCCGAGCAACTGAATGGGAAGAATTTGAATGGTCAAAGAAGGCTATTCATGTGAGCACTCGCAAACAGACGAAATGGTGGTATGCCAAGCGGTTTCTGCATCCCGACATTGTGGCACCATATGACTATATTTTTATATGGGATGAAGACTTGGGGGTTGAGCATTTTGATGCAGAGGAGTACCTAAAACTGGTAAGGAAGCATGGCTTGGACATTTCACAGCCAGCTTTGGAACCTAATAAAGGGTTGGTATGGCAGATGACAAAAAGAAGAGATGATGAAGAAGTTCACAAAGTAACCGAGGAGAAACCAGGACGGTGTTTTGATCCGCACATGCCTCCTTGTGCAGCGTTTATTGAGATTATGGCTCCAGTGTTTTCACGAGATGCATGGCGCTGTGTGTGGCATATGATTCAGAATGACTTGGTCCATGGGTGGGGTCTTGATTTTGCAATGAGAAAATGTGTTGAGCCGGCCCATGAGAAGATCGGAGTTGTTGATGCTCAGTGGATTGTTCACCAAGGTATTCCCTCGCTAGGGAATCAGGGCGAATCAGAAGACGTTGGGAAACCGCCACGGAACGGGGTTGAGCATAGGTGTAGAATGGAGTGGACAATGTTCCAAAATAGGATGGCTTATGCAGAAAATGCTTATTACAAATCTATGGGAATTGATATGTCTAAATCCACCCCTCCTTAA 1842 0.4218 MHPEFHEIATTADKLKHLSSEFSALSEPIDRVKKLLHYASLLPPLQDSDRVPENRVVGCSTQVWVVSEMDEEGRMRFKADSDSEIGKGYCWCLVWILDGAEPKEVLMVEKEDLSNMNVGLNIKAHSRVNTWQNVLFAMQKATKDMLFNTHQFHIAIIIGACMLVLIISYSNVLRLARRTQALLGQWPKWLEVYSISRVCILLASILVSYMENTCIPAIDKCFTSKKPSEIMRLIVTTFIGVIFGFFLGVSFPTLSITKLNLPSALLPSVDLSYIEDKYAGHYDWSFMKNNNRSSSRYQSSNDTSKIWVPSNPRGAERLPPGIVDAESDFNLRRLWGKPSEDLATKPKYLITFTVGYDQRDNIDKAVKKFSENFTILLFHYDGRATEWEEFEWSKKAIHVSTRKQTKWWYAKRFLHPDIVAPYDYIFIWDEDLGVEHFDAEEYLKLVRKHGLDISQPALEPNKGLVWQMTKRRDDEEVHKVTEEKPGRCFDPHMPPCAAFIEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFAMRKCVEPAHEKIGVVDAQWIVHQGIPSLGNQGESEDVGKPPRNGVEHRCRMEWTMFQNRMAYAENAYYKSMGIDMSKSTPP 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1643 613 Pfam Fe-S metabolism associated domain 20 140 IPR003808 -
Lal17g1643 613 Pfam Protein of unknown function (DUF707) 310 597 IPR007877 -
Lal17g1643 613 PANTHER PROTEIN, PUTATIVE (DUF707)-RELATED 218 611 - -
Lal17g1643 613 Gene3D - 4 144 - -
Lal17g1643 613 PANTHER OS06G0731900 PROTEIN 218 611 IPR007877 -
Lal17g1643 613 SUPERFAMILY SufE/NifU 14 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1643 Lal-Chr17 17728421 17737971 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1643 - - gmx:100811265 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1629 4 20428471 20433933 Lal17g1643 17 17728421 17737971 LSH
Lal14g1299 14 14630420 14634353 Lal17g1643 17 17728421 17737971 PCT