Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1637 ATGACATCTTCAGTGTTTGAGGATATACCTGAAGAGGGTAAACACGAGCCATCTGATTTGATCACAGAAACCACAAATCTGACGGCTACAAACCTTTCACTTCCCAATGATACTTTCCTTAGAGCTGCAATTTCCCTAAAGGACCAGGTGGTGGAAGTGACTTGGAATAAGAGACAAGTGATTGATCCAACGGTGTATAGTGGTCTTCTCGGAACAGCTTTCACTTGCTTGAGATCATATCAAGTTACTTCTAATCACAATGACTTGCTACTATGTGCCCAGATCGTTCACACGTGCTCCACTCTTGCACGTGCTTCCCTCAGGCACGTGACATTTTTGTGTGGTAGAGGAGGAGTATATGCGATTGGTGCAGTGGTTGCTAATTACATGGGGGACAGTATAAAGCGTGATATGTTTTTGGATCAATTCATTGAGGTAACGAATAAGGTCTTGGTCGAGTGGGCTAAGACCCACACACTTCATGGTTTGAATCCTGTGGCAAGGCAATTAGTAGGGATGCAATGGGTACCCGGATCTGAGGTAGCCGTCGGCAATACCCACAATGGGTCGAGTCTGAGTCCTTATTTTTTGAAACCCGCTGTTAAATGGTTTTGGGTTGATGGAGGGATGTTAGAGGTAGCAAAAGAGAGAGCACTACCTATAGGAGCAGAGGAAGGTGGATTTGGAATGTCATATGATCTTCTATATGGTAGAGCAGGATTCCTATGGGGAGCATTATACCTAAACAAGTACCTAGGAGAAGATACAATTCCAAATGAGATCTTAATGCCTATAATTGATGCTGTTATGGCTGGTGGTAGGGCTGGAGCATCTGATATTAAAGATTGTCCATTGATGTATAGATGGCATGGTACTAGGTACTTAGGTGCAGCAAATGGTCTTGCTGGTATTCTTCATGTGCTACTTCATTTTCCACTTTCTAGTGACTATGTTGAGGATATTAAAGGAACTTTGAGGTACCTTATGAGTAAGAGGTTCCCTCATAGTGGAAACTACCCTTCAAGTGAAGGGAATCCAAGGGATAAGTTGGTGCAGTGGAGTCATGGTGCAACTGGAATGGCTATCACCTTATCCAAAGCAGCACAGGTATTTCCAAGAGAGAGAGATATGAGAGAAGCAGCAATAGAAGCAGGGGAAGTAGTGTGGAAGAATGGATTGTTGAAGAAAGTAGGACTAGCTGATGGTGTATCTGGAAATGCTTATGCCTTCCTTTCACTCTTCAAACTAACTAAAGAGAGTATATATGAAGATAGAGCAAAAGCATTCTCTTATTTCTTGTATGATAAAGCAACAGCAGCAACTACAACAACAACAAGTGTAGCTGAAGAGGGTTATCCACCATTTATGGATGATGCTGATGCATATTCTCTTTTCCAAGGACATGCTGGAACTGCATGCCTCTGGTTTGATCTGCTTGCACCCCACAATTCTACATTTCCAGGCTATGAATTGTAG 1476 0.4275 MTSSVFEDIPEEGKHEPSDLITETTNLTATNLSLPNDTFLRAAISLKDQVVEVTWNKRQVIDPTVYSGLLGTAFTCLRSYQVTSNHNDLLLCAQIVHTCSTLARASLRHVTFLCGRGGVYAIGAVVANYMGDSIKRDMFLDQFIEVTNKVLVEWAKTHTLHGLNPVARQLVGMQWVPGSEVAVGNTHNGSSLSPYFLKPAVKWFWVDGGMLEVAKERALPIGAEEGGFGMSYDLLYGRAGFLWGALYLNKYLGEDTIPNEILMPIIDAVMAGGRAGASDIKDCPLMYRWHGTRYLGAANGLAGILHVLLHFPLSSDYVEDIKGTLRYLMSKRFPHSGNYPSSEGNPRDKLVQWSHGATGMAITLSKAAQVFPRERDMREAAIEAGEVVWKNGLLKKVGLADGVSGNAYAFLSLFKLTKESIYEDRAKAFSYFLYDKATAATTTTTSVAEEGYPPFMDDADAYSLFQGHAGTACLWFDLLAPHNSTFPGYEL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1637 491 PANTHER LANC-LIKE PROTEIN 17 150 - -
Lal17g1637 491 PANTHER LANC-LIKE PROTEIN 210 491 - -
Lal17g1637 491 SUPERFAMILY LanC-like 231 491 - -
Lal17g1637 491 Pfam Lanthionine synthetase C-like protein 226 491 IPR007822 -
Lal17g1637 491 Pfam Lanthionine synthetase C-like protein 61 165 IPR007822 -
Lal17g1637 491 SMART LANC_like_2 59 491 IPR007822 -
Lal17g1637 491 PANTHER LANC-LIKE PROTEIN GCL1 17 150 - -
Lal17g1637 491 PANTHER LANC-LIKE PROTEIN GCL1 210 491 - -
Lal17g1637 491 Gene3D - 4 178 IPR012341 GO:0005975
Lal17g1637 491 SUPERFAMILY LanC-like 45 144 - -
Lal17g1637 491 Gene3D - 215 491 IPR012341 GO:0005975
Lal17g1637 491 PRINTS LanC-like protein superfamily signature 62 80 IPR007822 -
Lal17g1637 491 PRINTS LanC-like protein superfamily signature 232 247 IPR007822 -
Lal17g1637 491 PRINTS LanC-like protein superfamily signature 294 310 IPR007822 -
Lal17g1637 491 PRINTS LanC-like protein superfamily signature 350 370 IPR007822 -
Lal17g1637 491 PRINTS LanC-like protein superfamily signature 397 410 IPR007822 -
Lal17g1637 491 PRINTS LanC-like protein superfamily signature 461 478 IPR007822 -
Lal17g1637 491 CDD euk_LANCL 65 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1637 Lal-Chr17 17704703 17708015 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1637 - - aprc:113849930 455.292