Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal17g1622 | ATGGCACCCACTTCCAAATTCCTCCCTCTATTCTTTCTTCTCTCCCTATGCTTCTCCACAACAATCATTTCAGGAGAAGAAGAAGATTGTGTGTACACAGTATTCGTTAGAACGGGTTCAATAATAAAAGGAGGAACCGATTCTATAATTGGGTTGAAACTATATGATAATTTTGGTTGGTATATTTACATCAAAAATTTAGAATCATGGGGTGGTTTAATGGACCCAGGTCATAACTATTTCGAGCGTGGCAATCTTGATATTTTTAGTGGTAGGGGTCCGTGTCTTGACGGTCCCGTTTGTGCCGTTAACGTTACTTCTGACGGTTCAGGTGCACATCATGGATGGTATGTTAATTACGTAGAGGTGACGTCAACTGGTGTTCACCAAACTTGTGCTCAGAATCAGTTCACTTTGGAGCAATGGATTGCTACTGATACTTCTCCTTATCAGCTTTGGGCTGAGAAGAATTTATGTGGGAATCAATTGGGTTTGGGCCTGGCCCGTCCTAAAACTAAGGTTGTTCATGATGTCGGCTCCGGGTCGGGTTATTCGATTTTGGATTCGGGTGTTGGAATGTAG | 582 | 0.4244 | MAPTSKFLPLFFLLSLCFSTTIISGEEEDCVYTVFVRTGSIIKGGTDSIIGLKLYDNFGWYIYIKNLESWGGLMDPGHNYFERGNLDIFSGRGPCLDGPVCAVNVTSDGSGAHHGWYVNYVEVTSTGVHQTCAQNQFTLEQWIATDTSPYQLWAEKNLCGNQLGLGLARPKTKVVHDVGSGSGYSILDSGVGM | 193 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal17g1622 | 193 | PANTHER | - | 1 | 189 | - | - | |
| Lal17g1622 | 193 | PANTHER | PLAT-PLANT-STRESS PROTEIN | 1 | 189 | - | - | |
| Lal17g1622 | 193 | CDD | PLAT_plant_stress | 30 | 157 | - | - | |
| Lal17g1622 | 193 | Pfam | PLAT/LH2 domain | 32 | 150 | IPR001024 | GO:0005515 | |
| Lal17g1622 | 193 | Gene3D | PLAT/LH2 domain | 31 | 151 | - | - | |
| Lal17g1622 | 193 | ProSiteProfiles | PLAT domain profile. | 30 | 157 | IPR001024 | GO:0005515 | |
| Lal17g1622 | 193 | SUPERFAMILY | Lipase/lipooxygenase domain (PLAT/LH2 domain) | 31 | 148 | IPR036392 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal17g1622 | Lal-Chr17 | 17594556 | 17595744 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal17g1622 | - | - | adu:107469134 | 270.011 |