Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1607 ATGTATGCAGTTCTCTTATTATGGCATGTTATAGTTTTGTTGGTTGTTTTAAATTTGGTGTGTGCTACAAGCCTTAACAATGGCACTACAACAATTGGGCACAAAAAGCATAGAAATGAGGCAATCCATGCTCATAAGGGAGCTGTTGCCAGTGATGACAAGCGATGTTCGAGGATCGGAAAAGATGTTCTCAGTGAAGGAGGGCATGCTGTGGATGCAGCTGTGGCTGTTGCTCTTTGTTTAGGGGTTGTTAGTCCAGCTTCAAGTGGCCTTGGTGGTGGAGCCTTTATGCTTCTTAGGTTAGCTAATGGGGTTGCAAAGGCCATTGATATGAGAGAAACTGCTCCTATTTTTGCTTCTGAGGATATGTATGATGGCGATGCTGATTTGAAAGCAAAAGGTGGCCTCTCAGTAGCAGTACCTGGAGAACTTGCTGGCCTTCACAAGGTGTGGAAGAAACATGGAAGGCTTCCATGGAAAAGACTTGTAAAGCCAGCCGTGATTCTTGCACGCGGGTATAAGGTATCGCCATACCTCCGAAAGCAGATGGAAGCAACAGAATCAGATATATTGGCAGACCACGGTCTTCGGAGTTTATTTGCACCAAATGGGAAACTCTTGAACATAGGTGACATATGTCACAACAAGAAACTAGCACGCACTCTGAGATTTATATCCGAGTTTGGTCCAAAAGCCTTCTATAATGGATTGATTGGCCATCATTTGGTGAGAGATGTTCAGAAGGCTGGAGGGATATTGACCATGAAAGACTTGAGAAGCTACACTGCTAAACAGAAAAAACCAATATCAAACGATGTTCTTGGACTAAAGATCCTCGGTATGCCTCCTCCTTCCGGTGGTCCTCCAATGATGCTTTTTCTGAACATTCTAGCTCAATATGACCTACCTTCAGGCCTTTCTGGATCTCTTGGAATCCATAGAGAAATTGAAGCTTTGAAACATGTATTTGCTGTGAGAATGAATCTTGGTGATCCTGATTTCGTAAATATAACTTCGGTTATTTCGGATATGCTTTCTCATAAGTTTGCTAAAGTGTTAAAGAAAGACATCAACGACAATAAGACTTTCAGTCCTAGTCATTATGGTGGCAAGTGGAATCAGATCCATGATCATGGTACAAGTCATTTGAGTATAATAGATCACGAGCGAAACGCCGTTTCCATGACTTCCACAGTAAATGCATATTTTGGTTCAAAGTTCCTTTCACCAAGTACAGGAATAGTACTGAACAATCAAATGGATGATTTTTCCATGCCTAGAAATGTTTCCAAGGATGTCCCACCACCAGCTCCTGCCAATTTCGTTGCACCACGGAAGCGGCCATTATCATCCATGTCACCAACCATTGTCCTGAAGGATGGGAAACTGAAAGCTGTAGCAGGTGCAAGTGGTGGAATTATGATCATTGGTGGAACTTCACAAGTTCTTTTGAATCACTTTGTCAGAGGAATGGATCCTCTTTCTTCTGTATTGGCTCCAAGGGTCTATCATCAGCTGATACCAAATGTGGTTACTTATGAGAATTGGACATCTGTGACTGGTGACCACTTTGAACTTCCTGCTGATACAAGGGAAGCCCTTAAAAGAAAAGGTCATGTCCTTAAAAGCCTTGTTGGTGGGACTGTTTGCCAATTTATTGTTCAAGACATTGAAAATAATGGTATTGGAAAGCTTGTGGCAGTAAGTGACCCAAGAAAAGGTGGTTTGCCTGCAGGCTATTAA 1743 0.424 MYAVLLLWHVIVLLVVLNLVCATSLNNGTTTIGHKKHRNEAIHAHKGAVASDDKRCSRIGKDVLSEGGHAVDAAVAVALCLGVVSPASSGLGGGAFMLLRLANGVAKAIDMRETAPIFASEDMYDGDADLKAKGGLSVAVPGELAGLHKVWKKHGRLPWKRLVKPAVILARGYKVSPYLRKQMEATESDILADHGLRSLFAPNGKLLNIGDICHNKKLARTLRFISEFGPKAFYNGLIGHHLVRDVQKAGGILTMKDLRSYTAKQKKPISNDVLGLKILGMPPPSGGPPMMLFLNILAQYDLPSGLSGSLGIHREIEALKHVFAVRMNLGDPDFVNITSVISDMLSHKFAKVLKKDINDNKTFSPSHYGGKWNQIHDHGTSHLSIIDHERNAVSMTSTVNAYFGSKFLSPSTGIVLNNQMDDFSMPRNVSKDVPPPAPANFVAPRKRPLSSMSPTIVLKDGKLKAVAGASGGIMIIGGTSQVLLNHFVRGMDPLSSVLAPRVYHQLIPNVVTYENWTSVTGDHFELPADTREALKRKGHVLKSLVGGTVCQFIVQDIENNGIGKLVAVSDPRKGGLPAGY 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1607 580 TIGRFAM g_glut_trans: gamma-glutamyltransferase 49 572 IPR000101 GO:0006751|GO:0036374
Lal17g1607 580 Pfam Gamma-glutamyltranspeptidase 62 575 - -
Lal17g1607 580 PANTHER GLUTATHIONE HYDROLASE 1-RELATED 21 579 - -
Lal17g1607 580 PRINTS Gamma-glutamyltranspeptidase signature 69 94 - -
Lal17g1607 580 PRINTS Gamma-glutamyltranspeptidase signature 137 155 - -
Lal17g1607 580 PRINTS Gamma-glutamyltranspeptidase signature 155 174 - -
Lal17g1607 580 PRINTS Gamma-glutamyltranspeptidase signature 252 268 - -
Lal17g1607 580 PRINTS Gamma-glutamyltranspeptidase signature 281 300 - -
Lal17g1607 580 PRINTS Gamma-glutamyltranspeptidase signature 380 398 - -
Lal17g1607 580 PRINTS Gamma-glutamyltranspeptidase signature 404 422 - -
Lal17g1607 580 PRINTS Gamma-glutamyltranspeptidase signature 444 459 - -
Lal17g1607 580 PRINTS Gamma-glutamyltranspeptidase signature 468 485 - -
Lal17g1607 580 PANTHER GAMMA GLUTAMYL TRANSPEPTIDASE 21 579 IPR000101 GO:0006751|GO:0036374
Lal17g1607 580 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 40 580 IPR029055 -
Lal17g1607 580 Gene3D - 268 372 IPR043138 -
Lal17g1607 580 Gene3D - 375 580 IPR043137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1607 Lal-Chr17 17449454 17453833 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1607 36 580 Miscellaneous Gene Families AT4G39640 66.909 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1607 K18592 - gmx:100797040 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1607 17 17449454 17453833 Lal17g1607 17 17449454 17453833 ECH