Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1600 ATGCTCCCTCTTTCAAAACTCCACCAATTACGAAGCGCCACGTCATCAACAACTAACTACCCTATTGAATCACTTAATTTTCCCAAAGATCTGGCTAACCTTTCAGAAGAAGCTGATTCCAAGAATCAGAAGCTAGTTCTCACTCTATATGACGCCTTAAACTCTTCCGATTCCGATACCGTCTCTAAAACCGTCGCTTCAGATCTTGAGTGGTGGTTCCATGGTCCTCCCTCTCACCAATTCTTGATGCACATTCTCACTGGCGAAGTTAGCTCCGTCAACAATTTCTATTTCCATTTCGTTCCTCAATCCGTTGTCTCCTTCGGTAACACCGTTATCGTTGAAGGCTGTGACGGTAACCGTAACATCTCTTGGGTGCACGCGTGGACTGTATCGGATGGGATAATAACTCAGGTTAGGGAGTATTTCAACACTGCACTTACCGTTACTCGTTTCGGAAATTCTCAATTTGATTCTGATTCCGATTCCAATTCCGGTTCAGAAATTGTTCCCGCAGTTTCTGACTCGGCTCGGTTCACTTGTGTTTGGGAAAGCACTGTCTCAAACCGGGTTGGAAAATCGGTTCCCGGTTTAGTCCTCGCAATATAA 609 0.4499 MLPLSKLHQLRSATSSTTNYPIESLNFPKDLANLSEEADSKNQKLVLTLYDALNSSDSDTVSKTVASDLEWWFHGPPSHQFLMHILTGEVSSVNNFYFHFVPQSVVSFGNTVIVEGCDGNRNISWVHAWTVSDGIITQVREYFNTALTVTRFGNSQFDSDSDSNSGSEIVPAVSDSARFTCVWESTVSNRVGKSVPGLVLAI 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1600 202 SUPERFAMILY NTF2-like 41 152 IPR032710 -
Lal17g1600 202 PANTHER SENESCENCE ASSOCIATED GENE 20 32 202 - -
Lal17g1600 202 PANTHER OS07G0691300 PROTEIN 32 202 IPR009798 -
Lal17g1600 202 Pfam Wound-induced protein WI12 83 202 IPR009798 -
Lal17g1600 202 Gene3D - 32 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1600 Lal-Chr17 17383347 17384098 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1600 - - lang:109327621 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g2284 1 24733723 24734190 Lal17g1600 17 17383347 17384098 ECH
Lal11g0971 11 13130213 13130701 Lal17g1600 17 17383347 17384098 ECH
Lal17g1600 17 17383347 17384098 Lal17g1600 17 17383347 17384098 ECH
Lal4g1595 4 20136163 20137091 Lal17g1600 17 17383347 17384098 LSH
Lal21g1270 21 15935623 15936321 Lal17g1600 17 17383347 17384098 LSH