Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1598 ATGGATTCCGCAACCGCCATTCGATCTTTTCACTATTCGATAGGCACTATGTCCCATCTGCAATCCTCACTTCAGAAGCCAGCTGTAGTTCTCAGCCATAATGTCAGATGGAACTCTAAAAGTAGACTTTCCATCCAACGCTTGGCAAATGGTGAGAAGCAAATTAGTTCTCACACCCGGGGGAAGAAAATGCAAGTGTCATGTGCAAAAGCAGTCGAAGCTATCAAAACAACCAAATCTGATGCTTCTTCGGATAGCACTCCACAAAAATCATTGGAGAAAAAGCCTTTAGAAATTGCTACTTTTCCTAATGGATTTGAGGATTTGATTTTAGAGGTCTGTGATGAGACTGAAATCGCTGAACTGAAAGTAAAGGTTGGTGAGTTTGAGCTGCATCTTAAGCGAAACGTTGGAGCAACAAAAGCTCCTCTCTCTAACATTTCACCAATTGCACCACCACCTATTCCAAGTAAACCTATGGTTGAATCAGCAACCGATGCACTGCTACCTTCACCACCAAAATCATCACCAGAAAAGACCAACCCATTTGCTAATGTTTCAACAGAGAAGTCATCGAAGTTGGCAGCTTTGGAGGCTTCTGGTGCCAATACCTATGCCTTAGTATCATCTCCTACGGTTGGCTTATTCCGAAGAGGTAGGACGGTGAAAGGGAAGAAGCAACCTCCTATCTGTAAAGAGGGCGATTTGATAAAAGAAGGACAAGTCATAGGGTATTTAGATCAGTTCGGAGCTGGACTTCCTGTTAAGTCAGATGTGGCTGGAGAAGTCTTAAAGCTACTTGTTGAGGATGGAGATCCTGTTGGTTATGGAGACCCACTCATCGCTGTCTTGCCATCATTTCATGACATTAAGTTAATGTGA 882 0.432 MDSATAIRSFHYSIGTMSHLQSSLQKPAVVLSHNVRWNSKSRLSIQRLANGEKQISSHTRGKKMQVSCAKAVEAIKTTKSDASSDSTPQKSLEKKPLEIATFPNGFEDLILEVCDETEIAELKVKVGEFELHLKRNVGATKAPLSNISPIAPPPIPSKPMVESATDALLPSPPKSSPEKTNPFANVSTEKSSKLAALEASGANTYALVSSPTVGLFRRGRTVKGKKQPPICKEGDLIKEGQVIGYLDQFGAGLPVKSDVAGEVLKLLVEDGDPVGYGDPLIAVLPSFHDIKLM 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1598 293 PANTHER IS A MEMBER OF THE PF|00364 BIOTIN-REQUIRING ENZYMES FAMILY-RELATED 1 291 - -
Lal17g1598 293 MobiDBLite consensus disorder prediction 160 187 - -
Lal17g1598 293 CDD biotinyl_domain 208 283 - -
Lal17g1598 293 PANTHER BIOTIN/LIPOYL ATTACHMENT DOMAIN PROTEIN 1 291 - -
Lal17g1598 293 Pfam Biotin-requiring enzyme 224 281 IPR000089 -
Lal17g1598 293 SUPERFAMILY Single hybrid motif 201 282 IPR011053 -
Lal17g1598 293 Gene3D - 204 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1598 Lal-Chr17 17361142 17368474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1598 22 285 Acyl Lipid Metabolism Gene Families AT5G15530 24.286 7.22e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1598 - - gmx:100792471 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1598 17 17361142 17368474 Lal17g1598 17 17361142 17368474 ECH