Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1586 ATGTGGTCACCTTGGGGGGGTTCATCAAGGCCAAGGCCTATCCTAACCGCCATATCACTACCATCGTCATCATCAGAATGCCGATCTCGATTTCACTCAAGTAGATTCTCTTACTCTTCCTTCAAAGACATTGATACCCTTCTTGAAAATGAACTTGATTCTTCCAAATCTCCCTCCTTATCCCGTAAATTTCACATCTCTCCCTCTCTTATCCACTCTTTTAACAACACAAACCCTCGAACTGTACCAACACCATCATACTCAATCATACATCCACCTCATTCTGACCACAACACCATTGTCTTTTACTTTACAACACTTCGTATCATTCGTCGAACCTATGAAGATTGTCGAGTTGTGCGTTCCATACTTCAAGGTCTTGGTATCACTATCGATGAACGTGATGTCTCCATTGACGATAGATTTCGTGATGAATTAAGAAGTATTCTCGGTCATTGGAATATAACACTACCATGTGTATTCATTGGTGGAAAATATATAGGTGGTGCTGATGATGTAAAGAGATTATACAATAGTGGTGAATTACAAGTTTTGATTGAAAAACTACCGAGATCAAAGGCTAATGGGTGTGATATATGTGGAGGATTGAGATTTGTTGTGTGTGATATTTGTGATGGAAGCCATAAAGTGTTCATGGAGAAGAGTGGATCAACAATCAAATGTGGAACATGCAATGCCAATGGTTTGATAAGGTGCCCTATGTGTTTCTTTATGCTCCCTCGACACACAAAATAA 756 0.3968 MWSPWGGSSRPRPILTAISLPSSSSECRSRFHSSRFSYSSFKDIDTLLENELDSSKSPSLSRKFHISPSLIHSFNNTNPRTVPTPSYSIIHPPHSDHNTIVFYFTTLRIIRRTYEDCRVVRSILQGLGITIDERDVSIDDRFRDELRSILGHWNITLPCVFIGGKYIGGADDVKRLYNSGELQVLIEKLPRSKANGCDICGGLRFVVCDICDGSHKVFMEKSGSTIKCGTCNANGLIRCPMCFFMLPRHTK 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1586 251 ProSiteProfiles Glutaredoxin domain profile. 87 193 - -
Lal17g1586 251 PANTHER GLUTAREDOXIN (GRX) FAMILY PROTEIN 29 246 - -
Lal17g1586 251 SUPERFAMILY Thioredoxin-like 94 187 IPR036249 -
Lal17g1586 251 Gene3D Glutaredoxin 95 189 - -
Lal17g1586 251 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 29 246 - -
Lal17g1586 251 CDD GRX_GRX_like 100 239 - -
Lal17g1586 251 Pfam Glutaredoxin 101 167 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1586 Lal-Chr17 17284813 17285568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1586 K17479 - gmx:100784009 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1588 4 20058086 20058940 Lal17g1586 17 17284813 17285568 LSH