Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1584 ATGGCTTTGAGGCAGTTCAGTATCCTTTCACTTCTCATAGTGGCCTTCACTTACACAAAAGCCAGTGAGCATTATCCACATGCAACAGAGAAGAAAATAGAGGTTGTGGTGGAAGCTACAGTATACTGCCAAAGCTGTGAACACTTTGGAACTTGGTCTATGATTGGAGCCAAACCAATTCCTTCAGCCAAAGTAAGTGTAACCTGCAAAACCCATAAGGGTCAAGTTAGCTACTACAAAGTCTTTGAGACAGACAAAAATGGTTACCTATATGCACCACTAAAAGGGTTCAAGATTCAGCATTATATATTAGACCATCCACTTCAATCTTGTGTTGCAAAACCTGTTTGGTCCTCTCTTGAAAGTTGCAGCCTTCTCTCAAATGTTAACTATGGTCTCAACGGCGCGCCGCTACGGTACGAGGATAAGAAATTGAAAGGAAGCAGATATGAAGCTATCATATATGCTGCTGGTCCTTTGGCTTTCCGTCCATCTAATTGCTCACAGACTCATTATTAA 519 0.4162 MALRQFSILSLLIVAFTYTKASEHYPHATEKKIEVVVEATVYCQSCEHFGTWSMIGAKPIPSAKVSVTCKTHKGQVSYYKVFETDKNGYLYAPLKGFKIQHYILDHPLQSCVAKPVWSSLESCSLLSNVNYGLNGAPLRYEDKKLKGSRYEAIIYAAGPLAFRPSNCSQTHY 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1584 172 Pfam Pollen protein Ole e 1 like 37 135 - -
Lal17g1584 172 PANTHER OS01G0164075 PROTEIN 8 169 - -
Lal17g1584 172 PANTHER NON-CLASSICAL ARABINOGALACTAN PROTEIN 30-LIKE 8 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1584 Lal-Chr17 17262596 17263114 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1584 - - gmx:100782212 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1584 17 17262596 17263114 Lal17g1584 17 17262596 17263114 ECH
Lal4g1586 4 20039448 20039972 Lal17g1584 17 17262596 17263114 LSH