Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1568 ATGGCTCCAATTCTTGTAGTTATTGCTGATGCACTTGTTCCTTCAGCTCTTCTCTCTACTTCTATTTCAATGGATTCTATCTCTTCACACTTCCATCACTATGATTTTCGATACTCTCTCATTGATATACCTCTTGTCTCCATCATAAGATCCTTCATCATCTTTTGTGTTTATAGCTTATGTGATGGACCAAGACGTTCAAGAGGACCCTATTTGGGTATCACCACCATGTGTTCTATTTTGTCCCTAATATTTGTGTCATTTAAAGCTATTTACATGTTCAACTTCTTGGGTGATGATAGACGAGGGTATGTTAGAGCCAAAGAAATAGCTTTATTCTTGTGCTCTTGTGCTTTGGCTTTGGGGCATGTGGTTGTGGCTTATAGAACAAGTTGTAGAGAAAGAAGAAAACTTTTGGTATATAAAATTGACATTGAAGCTTTAGGTAGCTCCATCCCATTTTCCTTCCCAAGAAAATAA 480 0.3729 MAPILVVIADALVPSALLSTSISMDSISSHFHHYDFRYSLIDIPLVSIIRSFIIFCVYSLCDGPRRSRGPYLGITTMCSILSLIFVSFKAIYMFNFLGDDRRGYVRAKEIALFLCSCALALGHVVVAYRTSCRERRKLLVYKIDIEALGSSIPFSFPRK 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1568 159 Pfam Cholesterol-capturing domain 24 92 IPR019498 -
Lal17g1568 159 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 2 149 - -
Lal17g1568 159 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 2 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1568 Lal-Chr17 17105151 17106672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1568 3 150 Miscellaneous Gene Families AT1G80280 45.342 7.38e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1568 - - gmx:100811069 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1568 17 17105151 17106672 Lal17g1568 17 17105151 17106672 ECH
Lal5g1123 5 13960777 13969972 Lal17g1568 17 17105151 17106672 LSH
Lal17g1568 17 17105151 17106672 Lal22g0225 22 1388311 1392721 PCT
Lal17g1568 17 17105151 17106672 Lal6g0239 6 1571485 1573362 PCT
Lal22g0225 22 1388311 1392721 Lal17g1568 17 17105151 17106672 PCT
Lal6g0239 6 1571485 1573362 Lal17g1568 17 17105151 17106672 PCT