Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1566 ATGGCATTTGTGCATGAAACTATGCATTTTCTTCTATTACTGTCCTTATCAACCTTCAGTTTCTCATCAATTAGCACCAATTCCCTAGCTATCTCATTATCTTCTTCAACTGCTAGACCTCAAAGATTGGTCTCGAAACTCATTCATCGGCGTTCGGTTCTTCATCCACTCTACGACCCGAATGAAACAACCAAAGATCATATAGAAAATGATATCGAACACTCGATTGCGCGCTTAACCTACTTACAAGCAAGGATTGATGGTACTTTGGCCTATGATGATCACAGGAGTAAGCTTTCTCCTTCGTTAACTGGTCGAACCATACTCGCGAATATCTCGATAGGCCAGCCCCCCATCTCACAGCTAGTTATTGTAGACACTGCAAGTGACATCTTTTGGATTATGTGCCACCCTTGCTCAAATTGTGACAACCATATAGGTCAACTTTTCGATCCTTCAAAATCGTCCACCTTTTCGCCACTATGCAAAACGCCTTGCGTCTACGGTCGCTGCGAATGCAGCCTCAATGATCAATTAACATACCATATCACATATGCAGACCAATCTGCTGCATCAGGAACAATTGGCCTAGACATGCTAGTTTTTGAGACATCTGATGAAGGTACCATTCAAGTACCGAATATCGAATTCGGGTGCAGCCACAACATTGTGTATAATAAAGATCCAGGGTACAATGGAATACTAGCACTAAACAATGCACCTCATTCTATAGCTTCACAAATTGGCCAAAAGTTTTCTTACTGCATAGGCAGCATAACTGACAAAAACTACAATTACAACCAATTAGTATTAGGCGAAGGCGCATATCTCGAAGGCGATTTTACGAGTTTTCAATCACTTTATGACAACTATTACCTTGCCATGGAAGGAATAAGCATAGGAGAAAAGAGGCTGGACATAGCACCAGAATCATTCGAGATGAAATCGAATGGCACGGGTGGAGTCATCATAGACACAGGATGTACACTAACTTACCTAGTTGATGATGTGTATAACTTAGTATATGAAGAAGTTAGAAATCTCATTGGTTCTTCATTTACAGAAATTAGATATGAAAATGTTCCATGGATGCTTTGCTATGCGGGTTTCGCGAGTCGAGATTTGGCTGGCTTTCCGGTTGTTACATTCCATTTTGCTGAAGGTGCAGAATTGGCTTTAGACACAAGAAGCTTTTTTCAACAGTCAGGGGATAACATATTTTGCATGACTATAGCACCAATAAGTGTGGCTGGCATTTCAAGTAAACCTTCTGTTATTGGTTTATTAGCTCAACAGAGTTATAATGTTGGATATGATCTCATTGATCAATTTATTTACTTCCAAAGAATTGATTGTGAACTTCTCAGTGGCTGA 1374 0.4017 MAFVHETMHFLLLLSLSTFSFSSISTNSLAISLSSSTARPQRLVSKLIHRRSVLHPLYDPNETTKDHIENDIEHSIARLTYLQARIDGTLAYDDHRSKLSPSLTGRTILANISIGQPPISQLVIVDTASDIFWIMCHPCSNCDNHIGQLFDPSKSSTFSPLCKTPCVYGRCECSLNDQLTYHITYADQSAASGTIGLDMLVFETSDEGTIQVPNIEFGCSHNIVYNKDPGYNGILALNNAPHSIASQIGQKFSYCIGSITDKNYNYNQLVLGEGAYLEGDFTSFQSLYDNYYLAMEGISIGEKRLDIAPESFEMKSNGTGGVIIDTGCTLTYLVDDVYNLVYEEVRNLIGSSFTEIRYENVPWMLCYAGFASRDLAGFPVVTFHFAEGAELALDTRSFFQQSGDNIFCMTIAPISVAGISSKPSVIGLLAQQSYNVGYDLIDQFIYFQRIDCELLSG 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1566 457 Pfam Xylanase inhibitor C-terminal 290 448 IPR032799 -
Lal17g1566 457 CDD pepsin_A_like_plant 109 452 IPR034161 -
Lal17g1566 457 Gene3D Acid Proteases 278 455 IPR021109 -
Lal17g1566 457 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 31 454 - -
Lal17g1566 457 Pfam Xylanase inhibitor N-terminal 110 272 IPR032861 -
Lal17g1566 457 SUPERFAMILY Acid proteases 109 452 IPR021109 -
Lal17g1566 457 ProSiteProfiles Peptidase family A1 domain profile. 108 448 IPR033121 -
Lal17g1566 457 Gene3D Acid Proteases 99 272 IPR021109 -
Lal17g1566 457 PANTHER OS07G0603500 PROTEIN-RELATED 31 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1566 Lal-Chr17 17093573 17094946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1566 112 455 Miscellaneous Gene Families AT1G44130 22.740 4.83e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1566 - - lang:109327872 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1566 17 17093573 17094946 Lal17g1566 17 17093573 17094946 ECH