Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1565 ATGGGAGGTTGCATTTCTTCTAGATCATACTCCACAAGCAACAATATTCGTTTGGTTCATCTAAGTGGTTATGTAGAAGATTTTGATCAACCAATTTCAGTGAACCAAGTCACTGGAAATTCCTCTAAGTACATTGTTTGCACTTCAATTCAGCTTCTTTCTTATTCTTCTTCTTCTCAATCACTTAAAGGAGACACAAAACTTCAACTTGGGAATGTGTACTTTATTCTACCTTGTTCAATTCTACAAGTTGATGTTTCTCCTATGGATTTGGCTTCACTTGCAAAGAGGCTCACAACAATAGCCAAAACTAGATGTGGTAGCAAAAAGTGCCTTAAAGATAGTTCCTTTATGGTTTCAAGGCAAAGTGAATGTATCAATTCATCACCTTGTAGGAGTGAAGGTAGATTAAGGGTAGTGGGTATGCAAAGTGATGTGACTTATGGAGGAAGAAACTCATTGAGAATGCAACCTTGGAAACCTTTATTGGATACCATTAGAGAGAGGTCATTCAATAGAAGAAGTGAATCAAATTTGCATGAAAATCATTGA 552 0.3641 MGGCISSRSYSTSNNIRLVHLSGYVEDFDQPISVNQVTGNSSKYIVCTSIQLLSYSSSSQSLKGDTKLQLGNVYFILPCSILQVDVSPMDLASLAKRLTTIAKTRCGSKKCLKDSSFMVSRQSECINSSPCRSEGRLRVVGMQSDVTYGGRNSLRMQPWKPLLDTIRERSFNRRSESNLHENH 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1565 183 Pfam PADRE domain 1 168 IPR025322 -
Lal17g1565 183 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 179 - -
Lal17g1565 183 PANTHER OS06G0700300 PROTEIN 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1565 Lal-Chr17 17090587 17091138 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1565 - - lang:109327839 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1565 17 17090587 17091138 Lal17g1565 17 17090587 17091138 ECH
Lal17g1565 17 17090587 17091138 Lal4g1567 4 19854410 19854961 LSH
Lal19g1248 19 15691542 15692054 Lal17g1565 17 17090587 17091138 PCT
Lal17g1565 17 17090587 17091138 Lal19g1248 19 15691542 15692054 PCT