Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1524 ATGGTGGTAAGGATTCGATTATCTCGATTTGGTTGTAAGAACAAACCATTTTATCGAGTAATGGCTGCTGATAGCAGATCCCCTAGAGATGGAAAACATCTCGAACTTCTTGGTTACTACAATCCCTTACCAGGTCAAGATGGTGAGAAAAGAATGGGTCTCAACTTTGATAGAATCAAGTATTGGCTTTCTGTTGGAGCTCAACCTTCAGACCCTGTGGAGCGTCTTCTATTCCGTGCAGGGTTACTGCCCCCACCACCAATGGTAGCTATGGGACGTAAAGGTGGACCACGTGATATGCGCCCTGTTGATGCACTAACTGGACGCATCCTGACTCAAGAGAAGCCAGATAGTACCAGCCACAAGGAAGATGATGGTGAACATGACACTACTACAACCGAAAACCCCTAA 411 0.4599 MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLELLGYYNPLPGQDGEKRMGLNFDRIKYWLSVGAQPSDPVERLLFRAGLLPPPPMVAMGRKGGPRDMRPVDALTGRILTQEKPDSTSHKEDDGEHDTTTTENP 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1524 136 Gene3D - 1 134 IPR023803 -
Lal17g1524 136 PANTHER 30S RIBOSOMAL PROTEIN S16 1 114 IPR000307 GO:0003735|GO:0005840|GO:0006412
Lal17g1524 136 MobiDBLite consensus disorder prediction 107 136 - -
Lal17g1524 136 Hamap 30S ribosomal protein S16 [rpsP]. 2 80 IPR000307 GO:0003735|GO:0005840|GO:0006412
Lal17g1524 136 TIGRFAM S16: ribosomal protein bS16 3 82 IPR000307 GO:0003735|GO:0005840|GO:0006412
Lal17g1524 136 SUPERFAMILY Ribosomal protein S16 3 94 IPR023803 -
Lal17g1524 136 Pfam Ribosomal protein S16 9 70 IPR000307 GO:0003735|GO:0005840|GO:0006412
Lal17g1524 136 PANTHER 30S RIBOSOMAL PROTEIN S16-LIKE 1 114 - -
Lal17g1524 136 MobiDBLite consensus disorder prediction 115 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1524 Lal-Chr17 16598040 16599946 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1524 K02959 - gmx:100499851 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1524 17 16598040 16599946 Lal17g1524 17 16598040 16599946 ECH