Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1515 ATGGAGTGTGTTGGAGTGAGAAACTTCACGTCAATGGCGGTTTCTTTAACATCTTCTTCTACGTTATGGTTACGAAGGAAGAATGTTACACGAACTTCGTTTTGTGGCAATGCGATTGCGTTGCGTAATCTTCATCTTCGTCTTCGTCGATGTAACCGTCGTCGTTTAGAGTCGTTTCTTGACGTTAAAGCTGGTGCAGGGAGCGAGAGTTGCGTTGTGACGAAGGAGGAATTTGCGGATGAGGAGGATTATGTTAAAGCTGGTGGCTCTGAACTTGTGTTTGTTCAAATGCAGCAGAAGAAGTCTATGGAAATGCAATCCAAGCTTGTGGAGAAGTTACCACCAATCTCTATAGGAGATGATATATTGGATCTAGTAGTGATTGGTTGTGGTCCAGCTGGTCTTGCTCTGGCTGCAGAGTCTGGCAAGTTAGGGTTAAAAGTCGGGCTTATTGGTCCGGATCTCCCTTTTACAAATAATTATGGTGTTTGGGAGGATGAATTTAAAGATCTTGGACTTGAAGGTTGTATTGAGCATGTGTGGAAGGATACCATTGTATATCTTGACAATAAGGATCCTGTTTTAGTTGGGCGTTCTTATGGACGTGTCAGTCGCCACCTTCTTCATGAGGAATTGTTAAGAAGGTGTGTGGAGTCAGGTGTTTCATATCTTAGCTCCAGAGTAGAAAGGATTGTTGAGGTTGGCAATGGTCAAAGTCATGTTGTCTGTGAATATGATACTGTAGTTCCTTGCAGGCTTGTTACTGTTGCATCAGGAGCAGCTTCAGGGAAACTGTTGGAGTATGAGGTTGGGGGTCCCAAGGTGTCTGTCCAAACTGCTTATGGTGTGGAAGTTGAGGTGGAAAACAATCCTTATGATCCAAACTTGATGGTTTTCATGGATTACAGAGATTACATGAAGCAAAATGTTCAATGCCCAGAAGAAAAATACCCAACATTTCTTTATGTGATGCCCATGTCTCCTACAAAAGTGTTCTTTGAGGAAACCTGTTTGGCTTCAAAAGATGCCATGCCTTTTGACTTATTAAAGAAAAAGCTCTTTTCAAGATTAAATACAATGGGTATCAGAATTACAAAAACTTATGAAGAGGAATGGTCTTATATCCCAGTTGGTGGATCCTTACCGAACACAGAGCAAAAGAACCTTGCCTTTGGCTACTCAGTTGTGAGATCTTTGTCAGAAGCTCCACATTATGCTTCAATAATTGCTACTATTTTGAATGAGGATCATGCAAAGGACATTGTCACTCATAAAAGAAGTAAAGAGAATCTATCTATGCAAGCTTGGCAGACACTTTGGCCACAAGAAAGGAAACGACAGAGAGCATTCTTTCTTTTTGGATTAGCATATATTCTGCAGCTGGACATTGAGGGCACTCGAACATTCTTTCGTACTTTCTTCCGCTTACCTGAATGGATGTGGCAAGGATTTCTTGGCTCCTCACTCTCCTCAACAGACCTTATCTTATTTGCATCCTACATGTTCATAATAGCACCACATAACTTAAGAATGAATCTGGTTAGACATCTGTTTTCAGATCCTACTGGGATAACTATGATAAGAACCTACTTAACCATATAG 1602 0.412 MECVGVRNFTSMAVSLTSSSTLWLRRKNVTRTSFCGNAIALRNLHLRLRRCNRRRLESFLDVKAGAGSESCVVTKEEFADEEDYVKAGGSELVFVQMQQKKSMEMQSKLVEKLPPISIGDDILDLVVIGCGPAGLALAAESGKLGLKVGLIGPDLPFTNNYGVWEDEFKDLGLEGCIEHVWKDTIVYLDNKDPVLVGRSYGRVSRHLLHEELLRRCVESGVSYLSSRVERIVEVGNGQSHVVCEYDTVVPCRLVTVASGAASGKLLEYEVGGPKVSVQTAYGVEVEVENNPYDPNLMVFMDYRDYMKQNVQCPEEKYPTFLYVMPMSPTKVFFEETCLASKDAMPFDLLKKKLFSRLNTMGIRITKTYEEEWSYIPVGGSLPNTEQKNLAFGYSVVRSLSEAPHYASIIATILNEDHAKDIVTHKRSKENLSMQAWQTLWPQERKRQRAFFLFGLAYILQLDIEGTRTFFRTFFRLPEWMWQGFLGSSLSSTDLILFASYMFIIAPHNLRMNLVRHLFSDPTGITMIRTYLTI 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1515 533 PANTHER LYCOPENE EPSILON CYCLASE, CHLOROPLASTIC ISOFORM X1 5 492 - -
Lal17g1515 533 Pfam Lycopene cyclase protein 124 510 - -
Lal17g1515 533 Gene3D - 123 391 IPR036188 -
Lal17g1515 533 PRINTS Pyridine nucleotide disulphide reductase class-I signature 124 146 - -
Lal17g1515 533 PRINTS Pyridine nucleotide disulphide reductase class-I signature 254 263 - -
Lal17g1515 533 SUPERFAMILY FAD/NAD(P)-binding domain 121 507 IPR036188 -
Lal17g1515 533 TIGRFAM carotene-cycl: lycopene cyclase family protein 124 513 IPR010108 GO:0016117|GO:0016705
Lal17g1515 533 PANTHER - 5 492 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1515 K06444 - gmx:100788180 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1515 17 16530757 16535763 Lal17g1515 17 16530757 16535763 ECH