Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1500 ATGATCTTTATCACTCTTCTTCCACCAATATATAGTCCTTTTCTTCAAGTAATGGAGGGTGATACATTTTCTAGTCTTGTTGTTGCAAATGGTACTCAAATTGATGGCAAAATCTTGCAAACATTTCAGAAGAGCTTTGTTCAAGTCCAAAACATCTTAGATCAGAACAGGTTACTCATCAATGAGATAAACCAGAATCATGAGTCTAAGGTTCCAGACAACCTTAACAGGAATGTTGGTCTTATTAGAGAGCTTAACAATAATATCAGAAGAGTGGTTGATTTATATGCAGATCTTTCTAGTTCTTTTACAAAATCTATGGAAGTTTCTTCTGAAGGTGATTCAAGTGGTGCTGTGAAATCAGATGGAAAAGGTGGTAGTGGCCAAAAGAGGCATAGGCCTATATAG 408 0.3603 MIFITLLPPIYSPFLQVMEGDTFSSLVVANGTQIDGKILQTFQKSFVQVQNILDQNRLLINEINQNHESKVPDNLNRNVGLIRELNNNIRRVVDLYADLSSSFTKSMEVSSEGDSSGAVKSDGKGGSGQKRHRPI 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1500 135 Pfam Early Flowering 4 domain 33 114 IPR009741 -
Lal17g1500 135 PANTHER PROTEIN ELF4-LIKE 4 18 134 IPR040462 GO:0042753
Lal17g1500 135 MobiDBLite consensus disorder prediction 107 135 - -
Lal17g1500 135 PANTHER PROTEIN ELF4-LIKE 3 18 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1500 Lal-Chr17 16427297 16429163 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1500 - - ccaj:109808760 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1500 17 16427297 16429163 Lal17g1500 17 16427297 16429163 ECH
Lal14g1658 14 16850989 16851333 Lal17g1500 17 16427297 16429163 PCT
Lal19g1198 19 15415348 15415692 Lal17g1500 17 16427297 16429163 PCT
Lal17g1500 17 16427297 16429163 Lal14g1658 14 16850989 16851333 PCT
Lal17g1500 17 16427297 16429163 Lal19g1198 19 15415348 15415692 PCT