Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1489 ATGAAAGCGGAGACTAATAGATTAAGGGGTAAAGGAGTTTGCCTTATTTCCGTCGTTCTCATTTGCACAATTATCAGTATATGGTCATGGGAGAAGACACCTGCTCTTAATATATCGGTTCCCTCTCAAACAAAAATGCAGTTACTTTCAGAAAATATCTCATTTGTGTCACATGAAGAAGCAAAAACTGAGGCTAAAAGAAATGAGAAAAAGGATAAAACGGCAAAACAAGAACATAGGCCAGATTTTGTCGATGACTCTCCACAACGGAGCTCTTTAATTAGTCAAAAAGAAGACAACAATCGGAACAACACTACAGATAATAAAGTATGTAACTATGCGAAAGGAAAATGGGTTCTGGACAACCGCCGCTCTTTTTATTCAGGATTTGGTTGCAAGAGATATCTCTCAAAAATGTGGGCTTGCCGCTTGACTAAACGCACTGATTTTGCATACGAGAAGCTTCGGTGGCAGCCTAAAGATTGTCAAATGGAGGAATTTGAAAGATCTAAATTTTTAAGAAGGATGCAGCACAAAACACTAGCACTTATGGGAGACTCATTGGGCCGGCAGCAGTTTCAGTCTTTAATGTGCATGCTCACTAGTGGTAAGAAGGCAGATGACGTGAAAGATGTCGGGAAGGAGTACGGATTGGCTCGAGCTAAGGGTTCTCCCCGCCCTATTGGGTGGGCTTACCGTTTCCTAAGCACCAATACTACCATTCTGTTCTACTGGTCAGCAAATCTCTGTGATGTCGAACCTATTGATGGCAGTAATCCAAGATCGGGTCAAGCAATGCACCTCGACCGGCCACCGGTGTTCTTGCGCCAATATCTTCACAAGCTTGATGTGCTGGTTCTTAACACAGGTCACCACTGGAATCGGGTAAAGTTCAAGGCTAATAGGTGGGTACTGCATGTGGGAGGTGTGCCAAAAACCGATAAGAAATTAGCAACGATGGAATCTGCTAAGAATCTGACTATTCACAGTATCGTTAGTTGGGTGAACTCACAGCTTCCAAAATATCCAGGTTTAAAGGTATTCTTTCGAAGCATCTCGCCGAGGCATTTTGTTGGAGGAGAGTGGAACACAGGAGGAAGTTGTGACAACACTACACCAATGTCGGTAGGAAAGGAAATACTGTCGGAGGAGTCAACTGATCAAGTTGCTGCACATGCAGTAAAAGGAACAGGAATCAAGCTCTTGGACATAACAGCTCTTTCTCATCTTAGAGACGAGGGTCATATATCGCGTTTCAGCATTTCGGCCAAACCCGGCGTACACGATTGCTTACATTGGTGTTTGCCTGGTATTCCTGATACATGGAATGAAATACTGTTTGCACAAATCTAG 1353 0.4331 MKAETNRLRGKGVCLISVVLICTIISIWSWEKTPALNISVPSQTKMQLLSENISFVSHEEAKTEAKRNEKKDKTAKQEHRPDFVDDSPQRSSLISQKEDNNRNNTTDNKVCNYAKGKWVLDNRRSFYSGFGCKRYLSKMWACRLTKRTDFAYEKLRWQPKDCQMEEFERSKFLRRMQHKTLALMGDSLGRQQFQSLMCMLTSGKKADDVKDVGKEYGLARAKGSPRPIGWAYRFLSTNTTILFYWSANLCDVEPIDGSNPRSGQAMHLDRPPVFLRQYLHKLDVLVLNTGHHWNRVKFKANRWVLHVGGVPKTDKKLATMESAKNLTIHSIVSWVNSQLPKYPGLKVFFRSISPRHFVGGEWNTGGSCDNTTPMSVGKEILSEESTDQVAAHAVKGTGIKLLDITALSHLRDEGHISRFSISAKPGVHDCLHWCLPGIPDTWNEILFAQI 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1489 450 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 14 59 450 - -
Lal17g1489 450 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 14 4 77 - -
Lal17g1489 450 Coils Coil 58 78 - -
Lal17g1489 450 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 166 448 IPR026057 GO:0016740
Lal17g1489 450 MobiDBLite consensus disorder prediction 88 106 - -
Lal17g1489 450 MobiDBLite consensus disorder prediction 59 106 - -
Lal17g1489 450 Pfam PMR5 N terminal Domain 110 163 IPR025846 -
Lal17g1489 450 MobiDBLite consensus disorder prediction 59 86 - -
Lal17g1489 450 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 59 450 - -
Lal17g1489 450 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 4 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1489 Lal-Chr17 16319259 16323392 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1489 - - gmx:100788136 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1489 17 16319259 16323392 Lal17g1489 17 16319259 16323392 ECH
Lal17g1489 17 16319259 16323392 Lal4g1514 4 19301669 19307684 LSH
Lal14g1644 14 16773919 16778780 Lal17g1489 17 16319259 16323392 PCT
Lal7g1047 7 16602155 16608249 Lal17g1489 17 16319259 16323392 PCT
Lal17g1489 17 16319259 16323392 Lal14g1644 14 16773919 16778780 PCT
Lal17g1489 17 16319259 16323392 Lal7g1047 7 16602155 16608249 PCT