Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1430 ATGGATTCATCACCAACCACACAATCTTCATCATCACCTTCTTTCTCTTCCTTCATTCATCGAACTTATTCTTCTTCTTCTTCTCCTCTCTCCAAATCTAACTCCGACGCTATTCAAAGCCTCTCTTCAATTCTCAACAACCCTCACTCCTCCGATCCTTCCTCCTCCTTCTTCACATGGTGGTCCTCCTCCACCACCGCTCCCTCTCCTCCCGATTTCAATCCTATTACTCCCAAACCTACCTCCGATTTCACCCGATCCGACTTCGATTCCTTCCTATTGCCGATTTCTGAACCCTATCATCGATTCCAAGACATTCGAAACCACGAGACGAAGGAGATCGATGATGCTGATCAAAACGGTGTCGTTTCGGGACAGGGAGAGGCGTTAGTTGCGTGTCTTCGTGAGGTTCCGTCGCTTTATTTTAAAGAGGATTTTCGGCTTGAGGACGGTGGTACGTTTAGGGCGGCGTGTCCGTTTTCGAATGTTTCGGAGAATTTAGCGCTGCAGGAGAAGCTGTCGCATTATTTGGATGTGGTGGAATTGCATTTGGTTAAGGAGATCTCGCTTCGGTCGAGTTCGTTCTTCGAGGCGCAGGGGCAGTTACAGGATTTGAATGCTAAGATTGTGGAAGGTTGTAGCAGGATTCGGGAATTGAAGGAGACGATCCGCCTCTTGGATTCGGATTTGGTTGAAAATGCGAGGCAGATTCAGGAGCTCAATGGCACTAGGACTAACCTCTTGGTGCTTCAGCAGAAATTGAGGCTTATATTATATGTTAATCAAGCTGTGTCTGCTCTCAAATTGCTTGTTGCATCTGCAGATTGTGCTGGATCACTGGATGTAACTGACGATCTGCAACATTTACTGGATGGAGATGAGCTCACTGGTCTGCATTGCTTTCGTCATCTTAGAGATCATGTGATAGGCTTTATAGAGGCCATAAACAGCATTCTTTCAGCAGAGTTTATTCGAGCTTCCATACATGATGCTGCAGAAACAGATGCGATAATTTTATCCAAAGCTAAAGCAAGGGCTTCCCTTCCAATGAATGGAAAGGATGATGAAGTAAAGTTGCAAGAAGAAGACACAGCTAATTTCAAAGACTGTCTTCTTCCTACCGTACTTGGATTGCTTAGAACGGCTAAACTTCCCTCTGTTCTTAGGATCTATCGAGATACGCTAACCGCTGATATGAAGAGTGCCATTAAGACAGCTGTGGCTGAGTTGCTTCCGGTTCTGGCTGCTCGGGGTTCAGATTCAGAGTTCTTTTCTGGAGAGAAAGCTGTAGATGCAGATGGTGGAGGTGCATCACTCGCTAGCAAGTTGAGGAGCCTGTCATCTGATTGCTTTGTGCATCTTCTGAGTGCTATTTTCATGATAGTACAGGCACATTTAGTGCGGGCTTCTGAAGTGAAAAAGGCCATTGAATGGATTTTGAGCAACTTCGATGGCCATTATGCTGCTGATTCAGTTTCCCCAACAATTGCTCATGGTTCTGCAGCCTCAGAAATATCCCAAGAAAGTGAGCTTCATGGTACTGCGTTTCTACCTTATTCACCTCAGCGGAGTGTTGCCAAGGGTCCTACTTTTCCAGGCAAAGCAATTGATGCCACAAGCTCCTCTAACATGTCAAAGAATTTCAGAGCTGATGTATTGCGGGAAAACGCAGAAGCTGTCTTTGCAGCATGTGATTCTGCTCATGGAAGATGGGCAAAACTTCTTGGAGTCCGCGCAGTTCTCCATCCTAGGTTGAAATTGCAGGAGTTTCTTACGATATACAACATCTCCCAGGAGTTCATTACTGCTACGGAAAAAATTGGTGGGAGATTGGGATACAGCATCCGTGGCACACTGCAGTCACAGGCCAAAGCTTTTATTGACTTTCAGCATGACTCTCGGATGTCAAAAATTAAGGCAGTGCTTGACCAAGAAACATGGGTGGAAATAGATGTGCCTGATGAATTTCAAGCTATCATCAATTTACTTTTTTCAAATGATGCATTAACTTCTGAGAACCTTAATGGTTCTGAGGATGATAATTCAACGAGTTACAGTGATGTTCAGCCGATTGCGTACACTGGACAGTCAAATGATGAACATAATAATTCCATTGAAGCATCCATTAGTAATGCTGCATCAGATAGATCCAAACCCCTGGATGAGTCAACGGAAAGAAATAGAGCTCATAGTAGGATTCCATCTGCACAGAGTAACCATACTGACACAAAAGACAATAAAAAATCTGTTTCTCAGGCTCTTTCCTACAAAGGTGTTGGTTATCACATGGTGAACTGTGGCTTAATATTGCTAAAGATGCTATCTGAGTACATTGATATGAACAATCTTTTGCCGACACTATCTTCGGAAGTTGTTCACCGTGTAGTGGAAATCTTGAAATTTTTCAACACAAGAACTTGTCAACTTGTGCTTGGGGCTGGTGCTATGCAGGTGTCTGGTTTGAAGTCCATCACTTCTAAACACTTGGCGTTGGCAAGTCAAGTCATTAGTTTTATACATGCTATTATTCCCGAAATTCGGCAGATTCTTTTTCTAAAGGTGCCGGAGACTAGAAAGATGTTATTGGTTGCTGAGATTGATCGAGTTGCTCAGGATTATAAAGTTCACAGAGATGAAATACATACTAAGTTAGTTCAGATAATGCGAGAAAGGTTACTAGTCCATCTACGTGGGTTGCCTCAAATTGTTGAGAGTTGGAATAGACCTGAGGATGCTGACCAGCAGCCTAGTCAATTTGCTCGGTCTCTTACAAAGGAAGTTGGATACCTACAACGTGTTCTATCTCGAACTTTGAATGAAGAAGATGTTCAAGCAATTTTCAGGCAAGTGGTCATTATATTTCATTCACAAATTTCAGAAGCATTTTCAAGATTTGATATAAGTACTCCTCAAGCACAAAATAGGCTATATCGGGACATCAAACATATTCTTCTGTGCATACGGTCATTGCCATCAGGTGATTTGAGTAAATCCGATACCGCAAACTGGGGTCAGCTGGACGAATTCTCGGTACAAAGATTCGGGAGAGATACTGTTCAGTAA 3063 0.4336 MDSSPTTQSSSSPSFSSFIHRTYSSSSSPLSKSNSDAIQSLSSILNNPHSSDPSSSFFTWWSSSTTAPSPPDFNPITPKPTSDFTRSDFDSFLLPISEPYHRFQDIRNHETKEIDDADQNGVVSGQGEALVACLREVPSLYFKEDFRLEDGGTFRAACPFSNVSENLALQEKLSHYLDVVELHLVKEISLRSSSFFEAQGQLQDLNAKIVEGCSRIRELKETIRLLDSDLVENARQIQELNGTRTNLLVLQQKLRLILYVNQAVSALKLLVASADCAGSLDVTDDLQHLLDGDELTGLHCFRHLRDHVIGFIEAINSILSAEFIRASIHDAAETDAIILSKAKARASLPMNGKDDEVKLQEEDTANFKDCLLPTVLGLLRTAKLPSVLRIYRDTLTADMKSAIKTAVAELLPVLAARGSDSEFFSGEKAVDADGGGASLASKLRSLSSDCFVHLLSAIFMIVQAHLVRASEVKKAIEWILSNFDGHYAADSVSPTIAHGSAASEISQESELHGTAFLPYSPQRSVAKGPTFPGKAIDATSSSNMSKNFRADVLRENAEAVFAACDSAHGRWAKLLGVRAVLHPRLKLQEFLTIYNISQEFITATEKIGGRLGYSIRGTLQSQAKAFIDFQHDSRMSKIKAVLDQETWVEIDVPDEFQAIINLLFSNDALTSENLNGSEDDNSTSYSDVQPIAYTGQSNDEHNNSIEASISNAASDRSKPLDESTERNRAHSRIPSAQSNHTDTKDNKKSVSQALSYKGVGYHMVNCGLILLKMLSEYIDMNNLLPTLSSEVVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFIHAIIPEIRQILFLKVPETRKMLLVAEIDRVAQDYKVHRDEIHTKLVQIMRERLLVHLRGLPQIVESWNRPEDADQQPSQFARSLTKEVGYLQRVLSRTLNEEDVQAIFRQVVIIFHSQISEAFSRFDISTPQAQNRLYRDIKHILLCIRSLPSGDLSKSDTANWGQLDEFSVQRFGRDTVQ 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1430 1020 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 54, CHLOROPLASTIC 1 1019 - -
Lal17g1430 1020 MobiDBLite consensus disorder prediction 1 37 - -
Lal17g1430 1020 MobiDBLite consensus disorder prediction 674 717 - -
Lal17g1430 1020 MobiDBLite consensus disorder prediction 674 749 - -
Lal17g1430 1020 Gene3D - 859 898 - -
Lal17g1430 1020 Pfam Vps54-like protein 761 891 IPR012501 GO:0042147
Lal17g1430 1020 PANTHER VACUOLAR PROTEIN SORTING 54 1 1019 IPR039745 GO:0000938|GO:0042147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1430 K17600 - gmx:100804432 1560.43