Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1428 ATGGAGGCAGAAGATGATAACAACAAAAAAGTGAGAATTTTCGTAGGAGGTTTAGGAGAAACTGTAACCCATGAAGATCTTCATAGATTGTTTTCTTCTCTTGGAACCATTGATGGGATTCAAACTATTCGAACCAAAGGTCGTAGCTTTGCTTACGTTGATTTCATCCCTTCTCCTACCGATTCTAAACCTCTTTCCAAGCTTTTCAGCAAGTATAATGGCTGTTTGTGGAAGGGTGGAAAACTGAAACTTGAGAAGGCCAAAGAAAATTATCTTATACATTTGAAAAAAGAATGGGAAGAAGCTGCTGCTGCGGAGGTTGTTAGTAGCCAGCCTGACACTAGTGACACTACTAATGTTGATAGTGACAAAGGTCTTTCCTTGGAGGAGATGCACAAGAGAAAGGAGAGTTTGAAGACAAAGCAGCTGCACATTTTTTTTCCCGGGTTAAGAAAGGTGAAATCCATACCATTCAGTGGAACTGGCAAGCACAAATACAGTTTCCAGAATATTAAAGTACCTTCAATGCCTGTACATTTCTGTGATTGTGAGGAGCATTGTAGTCCTTCTGGCACAGAAAGGGGAAAGCTATGTTTTGATCGGGTAGCAGCAGAAAGTGGTGGAATGAATGATGAAGAAATCAACGTAATGAATGCTGTGATGAACAAGCTATTGCAAAAAGAAAAGATTTCCAACACCGAGCATCTTGAAAAGCAACGGGATTCTCTTGAATCACCTGATGCTGTACAATCCAATGAATCTGAGACTGGTAGCGGAACAGATGAAGATGACATCATAATTAATATTCAAACGAGTAAAAGTAAGGCAGCTTTAACAGGTAGTGAGGAACTTGAAAGATTATTGCAAAGTCAGGAATCATGGTTGAATAAAACAAGAATTGCTAAGGAAGAACCCAGCAAGACTACGACTGAAGTGAAGAAAAAGAATAATCACAATACTAGCAAGAAGAGAAAATCACTTCCGAAATTGGAAAAGGAAAGCAATGGGAGTGTGTCTACCACACCTGGAGGCAAGAGTAGTATGCAGACCCATCCACATGAGGTGGGATCTGATGGGCAACCTAGTGATTCAGAAGATAGTAGCTTTGGGGAAACAACTAAAGTTTCTTGCTTTCAGAAGTCTTCATGGAAAGAACTTCTTGGTGATGGAGGCAGTACTGCTTTCAATGCCTCTTTCATACTGCCAAAGTTCGATTCTAGTAAAGATCAACAGAGTCCTGATAGTCCATCCACACCTTCATCTACTAAGAAAAAAGCAAAAAAGTCAAAGAGGGATGGATCCGTAGTGAGCAGACCTACCAATACAAAAGTGGTAGAAGTGCTTGCTGAAGCTCCGCCTTCAGGTACACAAGTGATAGAAGAGCATGCTGAAGCTCAGACTACTGGTACACAAGTGATAGAAGAGCATGCTGAAGCTCAGCCTACTGACAAAAATGTGGCACCAAAGAAGACTGGTAGAGGTGCTTCATGGCTGCAAAAGGAATCATGGACACAACTGGTTCGTGAGAATAACAGTTCATTTAGCATTTCACAAATTTTGCCTGGCATCACTTTCCCAGAACCAATGCCAACGGAGCCCGTTGTGTACCCTGCCAATTCCAATGATAGAAAGCACAGTGGTGTAGCTAAGGATACCATTAATGAACTTGTTAGTGATGGGCTTAACTTGGGGGAGACTATAACTGATAAGAGTCAGCATGTCTGTGCTGCTGATATTACTTCTGCTCCAATAACGGAGGAAAAGAATGAAATAGAACCAATGGAAGGAACCACTGAAGAAACAACCCCAAAGGAAAGGTCCATTGAAGTCGTTGAAATAAGTGAAACTTGCTCGTTTATGAGAAATGCTTCTTCATTGAAAGACTGGGCCAAAGCTAAGGCTGCTCTCAGTGGTTCCCTCAAAAGAAAACGTGGTGAGAAGTAA 1944 0.4136 MEAEDDNNKKVRIFVGGLGETVTHEDLHRLFSSLGTIDGIQTIRTKGRSFAYVDFIPSPTDSKPLSKLFSKYNGCLWKGGKLKLEKAKENYLIHLKKEWEEAAAAEVVSSQPDTSDTTNVDSDKGLSLEEMHKRKESLKTKQLHIFFPGLRKVKSIPFSGTGKHKYSFQNIKVPSMPVHFCDCEEHCSPSGTERGKLCFDRVAAESGGMNDEEINVMNAVMNKLLQKEKISNTEHLEKQRDSLESPDAVQSNESETGSGTDEDDIIINIQTSKSKAALTGSEELERLLQSQESWLNKTRIAKEEPSKTTTEVKKKNNHNTSKKRKSLPKLEKESNGSVSTTPGGKSSMQTHPHEVGSDGQPSDSEDSSFGETTKVSCFQKSSWKELLGDGGSTAFNASFILPKFDSSKDQQSPDSPSTPSSTKKKAKKSKRDGSVVSRPTNTKVVEVLAEAPPSGTQVIEEHAEAQTTGTQVIEEHAEAQPTDKNVAPKKTGRGASWLQKESWTQLVRENNSSFSISQILPGITFPEPMPTEPVVYPANSNDRKHSGVAKDTINELVSDGLNLGETITDKSQHVCAADITSAPITEEKNEIEPMEGTTEETTPKERSIEVVEISETCSFMRNASSLKDWAKAKAALSGSLKRKRGEK 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1428 647 MobiDBLite consensus disorder prediction 233 264 - -
Lal17g1428 647 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 13 55 IPR000504 GO:0003723
Lal17g1428 647 Gene3D - 1 91 IPR012677 -
Lal17g1428 647 MobiDBLite consensus disorder prediction 404 422 - -
Lal17g1428 647 MobiDBLite consensus disorder prediction 108 122 - -
Lal17g1428 647 MobiDBLite consensus disorder prediction 298 373 - -
Lal17g1428 647 MobiDBLite consensus disorder prediction 106 126 - -
Lal17g1428 647 MobiDBLite consensus disorder prediction 332 373 - -
Lal17g1428 647 PANTHER TRANSCRIPTIONAL REGULATOR 2 646 - -
Lal17g1428 647 MobiDBLite consensus disorder prediction 298 316 - -
Lal17g1428 647 MobiDBLite consensus disorder prediction 404 443 - -
Lal17g1428 647 CDD RRM_NOL8 12 88 IPR034138 -
Lal17g1428 647 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 11 89 IPR000504 GO:0003723
Lal17g1428 647 SMART rrm1_1 12 85 IPR000504 GO:0003723
Lal17g1428 647 SUPERFAMILY RNA-binding domain, RBD 5 89 IPR035979 GO:0003676
Lal17g1428 647 MobiDBLite consensus disorder prediction 245 264 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1428 - - lang:109328135 801.971