Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1420 ATGGTGAAGAAGGAGATTGAAAAGAAGAGTTATGGGTCGCGATGGGTTAAGGTTGTTGTTGTTCTTGTCGCTGTGTTTGTTGCTATTGCTATGTCTTCCAGAACTTCTTCCAATATAGCTTTTTTTGGAGCCATTGATCGAGCTTGTCCATGTTCTCGGAGTACACCAAAGTATAGCGGCATGGTGGAGGATTGTTGTTGTGACTATGAAACTGTGGATCATCTTAACGAGGAAGTGTTGAATCCATCCCTTCAAGAGCTTGTGAAAACTCCATTCTTTCGGTATTTTAAGGCCAAGTTATGGTGTGACTGCCCTTTCTGGCCTGATGATGGTATGTGCAAGTTACGGGACTGTAGTGTATGTGAATGCCCCGAAAGTGAGTTCCCTGAATCATTTAAGAAGCCCTATCGCCTTTCATTGAATGATCTCGTTTGTCAAGAAGGAAAACCTCAGGCAGCTGTTGACCGTACCTTGGATAGTAAAGCTTTTAGGGGATGGACGGAAATAGACAATCCCTGGACAAATGATGACGAGACTGACAATGGTGAAATGACATATGTGAACCTTCAACTGAATCCTGAAAGGTACACTGGTTACACCGGTCCATCTGCAAGAAGGATATGGGATGCTGTCTACTCCGAGAACTGCCCCAAATATCCATCTCAAGAATCATGCCAAGAGAAAAAGATTTTATATAAATTGATATCAGGTCTTCACTCCTCCATATCAATACATATAGCTTCTGATTATCTACTTGATGAAGCTACAAATTCGGTAAATCTCAGCTTCGGTAAACCAACTGCACATTTCGCAACATTATGCATGTTACTTAGTCCAATCATCATAATATTTACAAGTTTATATGAATATCTAACTGCTTTCTCTCTTCTAAAACTATTCCAGTGGGGCCAAAATCTTACTTTGCTGTATGATCGAGTCCTACAATACCCCGACCGTGTCAGTAATTTGTACTTCACTTTTCTCTTTGTCCTGCGAGCAGTAACGAAAGCTGCAGATTATCTTGAACAAGCTGAGTATGATACCGGTAACCTTAACGAGGACCTTAAGACACAATCCTTGATGAAACAACTACTTTACAACCCCAAACTTCAAGCTGCATGTCCAGTTCCATTTGATGAAGCTAAGCTGTGGAAAGGCCAAAGTGGACCTGAGCTGAAACAGAACATTCAACAACAGTTCAGAAACATTAGTGCATTGATGGATTGTGTAGGATGTGAAAAATGTCGATTATGGGGGAAGCTTCAGGTTCTTGGTCTTGGTACTGCATTAAAGATTCTCTTCTCCGATGATGGTCAAGAAAATCTGGGTCATATACTGCAGTTGCAAAGGAATGAAGTAATCGCATTGATGAATCTTCTAAATCGGCTGTCAGAATCTGTCGAACTCGTCCGCGAAATAGGACCTACAGCTGAAAGAATCATTGAAGGACATCCTTCTAGATATAACACACTGATCAAGTCATGGAAAAGAATTCTGTCCTATGTGCTCAAAACATAG 1518 0.4104 MVKKEIEKKSYGSRWVKVVVVLVAVFVAIAMSSRTSSNIAFFGAIDRACPCSRSTPKYSGMVEDCCCDYETVDHLNEEVLNPSLQELVKTPFFRYFKAKLWCDCPFWPDDGMCKLRDCSVCECPESEFPESFKKPYRLSLNDLVCQEGKPQAAVDRTLDSKAFRGWTEIDNPWTNDDETDNGEMTYVNLQLNPERYTGYTGPSARRIWDAVYSENCPKYPSQESCQEKKILYKLISGLHSSISIHIASDYLLDEATNSVNLSFGKPTAHFATLCMLLSPIIIIFTSLYEYLTAFSLLKLFQWGQNLTLLYDRVLQYPDRVSNLYFTFLFVLRAVTKAADYLEQAEYDTGNLNEDLKTQSLMKQLLYNPKLQAACPVPFDEAKLWKGQSGPELKQNIQQQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSDDGQENLGHILQLQRNEVIALMNLLNRLSESVELVREIGPTAERIIEGHPSRYNTLIKSWKRILSYVLKT 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1420 505 Pfam Endoplasmic Reticulum Oxidoreductin 1 (ERO1) 80 469 IPR007266 GO:0005783|GO:0015035|GO:0016972|GO:0034975|GO:0071949
Lal17g1420 505 PIRSF ERO 12 505 IPR007266 GO:0005783|GO:0015035|GO:0016972|GO:0034975|GO:0071949
Lal17g1420 505 SUPERFAMILY ERO1-like 67 479 IPR037192 -
Lal17g1420 505 PANTHER ENDOPLASMIC RETICULUM OXIDOREDUCTIN-2 1 258 - -
Lal17g1420 505 PANTHER ENDOPLASMIC RETICULUM OXIDOREDUCTIN-2 301 501 - -
Lal17g1420 505 PANTHER ERO1-RELATED 1 258 IPR007266 GO:0005783|GO:0015035|GO:0016972|GO:0034975|GO:0071949
Lal17g1420 505 PANTHER ERO1-RELATED 301 501 IPR007266 GO:0005783|GO:0015035|GO:0016972|GO:0034975|GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1420 Lal-Chr17 15659655 15666106 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1420 K10950 - gmx:100798225 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1420 17 15659655 15666106 Lal4g1434 4 18501000 18505739 LSH