Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1390 ATGATGAAGGCAGTGTTCTTAATCTTGTTATATTACTTCGTTTTCCTTACTCACGTCTTCTCCCAACAAATCTTCCCTGAAAATCTCGGTAGCACATTCGGTGGTGGAAGCACTCATGAACCCAAATACAAGATTGAATTTCATCAACAACATTCACCTTTTCATCCTGACGATGATCAGGAATCTATTGTCATACCGGATAAAAACGGACAGAAATTTATCTGTTACTTGCCTAAGGTGGAAAAGGAAAAAAGTGGAAAGCCTGTTATTCAGACCAATATTAGCAGCATGATTGTCGGGACTGAGAAAAGGATTAAACAGAAGACGCCAGATGAACTGCTGGAAGTGTTAAAGGGCCCATGCTTTATCAGACAAGAAGGTTGGTGGGCATACGAATTTTGCTATCAAAAGAAGTTACGACAAATACATTTGGAGGATGAGAAGGTGGTCCATGAATTTGTCTTGGGAGTGTATGATCAAGAGGCTACATCTGCCTTTAACCAAAACCTTTCTGACATTTCTACATTGAAGGATCCCCGGTCAAAAGATCTATCTCAAAGGTATCATGCTCACATATATACTAATGGAACCTTATGTGATCTTACAAATAAACCACGAGAGACCGAGGTGAGGTTTGTATGCTCAGAGACTAGAGCAATGGTTAGTTCAATCACAGAGATTTCCACTTGCAAGTATGCACTTACGGTTCAATGCCCTACGTTATGCAAGCACCCATTGTTTCAAGAGGAGAGACCAGTGTGGCACACCATTGACTGTAATGTGCTTCCAAAGGATCACAAGGATGATAAAGTGATGCAAGAAAACAGAAATATGGAGATTGTTATGGTCACAGATTCTGAAGTTGATGATTCAGAACAATGA 882 0.4014 MMKAVFLILLYYFVFLTHVFSQQIFPENLGSTFGGGSTHEPKYKIEFHQQHSPFHPDDDQESIVIPDKNGQKFICYLPKVEKEKSGKPVIQTNISSMIVGTEKRIKQKTPDELLEVLKGPCFIRQEGWWAYEFCYQKKLRQIHLEDEKVVHEFVLGVYDQEATSAFNQNLSDISTLKDPRSKDLSQRYHAHIYTNGTLCDLTNKPRETEVRFVCSETRAMVSSITEISTCKYALTVQCPTLCKHPLFQEERPVWHTIDCNVLPKDHKDDKVMQENRNMEIVMVTDSEVDDSEQ 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1390 293 Gene3D - 118 238 IPR009011 -
Lal17g1390 293 SUPERFAMILY Mannose 6-phosphate receptor domain 184 243 IPR009011 -
Lal17g1390 293 PANTHER PROTEIN OS-9 7 275 - -
Lal17g1390 293 Pfam Glucosidase II beta subunit-like protein 120 199 IPR012913 -
Lal17g1390 293 ProSiteProfiles MRH domain profile. 119 244 IPR044865 -
Lal17g1390 293 PANTHER OS-9-RELATED 7 275 IPR045149 GO:0030433|GO:0030968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1390 Lal-Chr17 15322055 15325470 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1390 K10088 - gmx:100803528 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1390 17 15322055 15325470 Lal17g1390 17 15322055 15325470 ECH
Lal17g1390 17 15322055 15325470 Lal4g1411 4 18321151 18325193 LSH