Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1351 ATGTTGGAGAGAAGAATGAAGAGTCATGAAGAAGAAGAAGGAATTGGAAGATTGAAAAGAAACCCAATTGTTGGGGTCACTGCTTCTGGTGGAAAGAGAAAAACTTGGAATTCAGAAGATGGAATCAAGAAGAGTCAAATTCAAAGGAAAAAAATTGGTTTTTCTGCTGATAAATCTGTCAGAAGAAGCATAATTCACACCACAAAGCTAAGATCTGAAAAACAAGGTGGTGAAGGGAAATTGTTGAAGACCAATTCAGATTCATTCAATAAGAATGATTCTGATTCTGCTCATAGTTTGAGGAAATCGAAATCGGATTCGGGTTCGAGTTCGGGTTATGTTTTGAATGAATCAAGGAATGTGAATGATGTATTAGATAGTAGTAAATGTGAAATGGTTGTTGTTGAAGATGAGAACAAGAAGAATGATTGTGATGAAAAAAATTTCAATGATTTTGAGGTGTGTCGAGAGAAAGTGATTTCAAACAATTTAAACAATGAAAGTGTTGTTAATGATGAAGAAGAAGAGGTTGAGATTAAATTGGAGAATGAAACCTTTGATGTGAAGGAAATTAATGTTCCAGAATCAAATTCCAATGTTGTTGTGAAGGAACAAGAAAATAAGAACATTGTTGTGCATGAAGTAGAAAAAAAGAAGGTTATGATTGATGAATCAGAGAATAAGAAGAAGAAGAAGAAGAAAATTCTGAATGAATCAGAACCAAAGAAGATTGTGAGTGCCAATATGAGATTTCATCACACAAATGAAAAACCATTATCTGTTCCTATGGTTTTGAACCAAAATTTCAACAAAGCTAATTCAATTCCAAAGGAAGAATATGATACCTTTCCACAAACCCAGAACAAGCTACAGAGTCTAGTGGATTTAATCATGTGGAAAGATGTCTCTAGATCAGCATTTATCTTCGGATTTGGAACATTTGTTATAGTCTCATCTTCTTATGCAAAGGATGTCAATTTGAGTATTGTTTCTGTGATGTCCTATATAGGCCTTATCTATCTTGCTGTCATCTTCCTCTATAGATCCTTAGTTTGCAGGGGTGTCATAGATGTAGAGGACTCAAATTATGTCCTTGGAGAAGAAGAAGCAATTTGGGTGCTAAAATTGTTCCTACCTTACTTCAATGAGTTATTGTCAAAATTCAAACCTTTGTTTTCTGGAGATCCTGGAACCACAATAAAGTTGGCAGTTTTGCTCTTTGTTATGGCCAGATGTGGCAGCTGTATAACAGTTTGGAAGATGGCTAAAATTGGTTTCTTTGGAGTTTTTACGGTACCAAAAATATGCTCTTCTTATTCAGCACAGTTAACTGCATATGCAAATTTTTGGATCCTTCGATTTCGGGATGCTTGGGATTCTTGCTCTCACAAAAAAGCTGTGGCTTTAGGCATTTTTGGGCTTGTATGGAATTTGTCATCAGTTATTGCACGCATTTGGGCAGTGTTCGTGCTATTTGTGGCATTCAAATATTATCAACAACATTATTTGATGAGAGAAGAATGCATCGAAGATGAAGCAGAATGTGATGAAACATTGCATGAACTAGTTGAAGTTGGACTCAAAAAAGGGAATGTAGCATCATGCTTCATTGATACCAATAAAGTAAAGAAAAGATTCTAA 1641 0.3504 MLERRMKSHEEEEGIGRLKRNPIVGVTASGGKRKTWNSEDGIKKSQIQRKKIGFSADKSVRRSIIHTTKLRSEKQGGEGKLLKTNSDSFNKNDSDSAHSLRKSKSDSGSSSGYVLNESRNVNDVLDSSKCEMVVVEDENKKNDCDEKNFNDFEVCREKVISNNLNNESVVNDEEEEVEIKLENETFDVKEINVPESNSNVVVKEQENKNIVVHEVEKKKVMIDESENKKKKKKKILNESEPKKIVSANMRFHHTNEKPLSVPMVLNQNFNKANSIPKEEYDTFPQTQNKLQSLVDLIMWKDVSRSAFIFGFGTFVIVSSSYAKDVNLSIVSVMSYIGLIYLAVIFLYRSLVCRGVIDVEDSNYVLGEEEAIWVLKLFLPYFNELLSKFKPLFSGDPGTTIKLAVLLFVMARCGSCITVWKMAKIGFFGVFTVPKICSSYSAQLTAYANFWILRFRDAWDSCSHKKAVALGIFGLVWNLSSVIARIWAVFVLFVAFKYYQQHYLMREECIEDEAECDETLHELVEVGLKKGNVASCFIDTNKVKKRF 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1351 546 ProSiteProfiles Reticulon domain profile. 293 453 IPR003388 -
Lal17g1351 546 MobiDBLite consensus disorder prediction 68 115 - -
Lal17g1351 546 Pfam Reticulon 294 448 IPR003388 -
Lal17g1351 546 PANTHER RETICULON-LIKE PROTEIN B17 18 546 IPR044647 -
Lal17g1351 546 MobiDBLite consensus disorder prediction 1 44 - -
Lal17g1351 546 MobiDBLite consensus disorder prediction 1 18 - -
Lal17g1351 546 PANTHER RETICULON-LIKE PROTEIN B21 18 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1351 Lal-Chr17 14790408 14797437 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1351 K20720 - gmx:100799847 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1351 17 14790408 14797437 Lal4g1365 4 17897009 17902826 LSH