Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1287 ATGCTTGCCTACGACCCAAGCTTTGTGCTTCGACCCAAAGCCCCGATACCCGATCCAAACCCGACCCGGTCTTCTCTCTTCAGTTCTCGTTTCTCCTTCGATCCACGATCTTGGTTCAGACCCAGCTTTGCGGTGGGGCCCAATCTGTCACTCAATTCCGTTGAAATGGTAGCGCTCCGCCGAATTGGCTGCGGTTGTTTCAAGAACCACCGTCTCAAGGTGGAGGCTGTCAGCGGCGGCGAGGACTTGTTCGATACTGCAACCGTTAAGCCCGTACCTTATCATCTTGTTATTATGGTTAATGGTATAATTGGGAGTGCTTCGGATTGGAGATATGCAGCAGAGCAGTTTGTGAAGAAGCTTCCGGATAAAGTTGTTGTACACCGCAGTGAATGCAATTCTTCAAAATTGACGTTTGATGGTGTTGATACGATGGGTGAGAGGCTAGCCGAAGAGGTTCTATCTGTTATTAGACGTTGGCCAGAGGTGCAGAAGATATCCTTTGTGGCACATTCTTTAGGAGGCTTGGTGGCTAGATATGCTATTGGGAGACTTTATGAGTATTCTTCTACATTGGAACCTTTAGGTACAAACAGAAACTGCTCCAGTGAAGAGAAGACAGAATATTCAAAGCAATTACTTGAACAACGTAATGAAGCCAAGATTGCTGGCTTAGAGCCAATGAACTTCATAACATTTGCAACACCACATCTTGGTTCAAGGGGAAATAAACAGCTTCCATTTCTTTGTGGTCTTCCTTTCCTTGAGAGAAGTGCATCCCAAACTGCACATTTAGTTGCAGGGAGATCTGGGAAGCATCTCTTCCTCATGGACAACGATGATGGAAAGCCTCCTCTGCTCCTGCAAATGGTTGATGACTCTGATGATTTAAAATTTATGTCAGCTTTACGTGCGTTCAAGCGTCGGGTGGCATATGCAAATGCAAATTACGATCGTATCCTCTTCGTAATTTTGGTTTTGAATAATGGTGCAGATAGAGAAATAGTTTTCATGTTCTGTTATTTCTTGACTTTGCCTGAAGATATGGTTGGTTGGCGTACCTCATCAATTCGTCGTCAACATGAACTTCCAAAGTCCAATCTTCTTGTAATCGATGCGAAATACCCACATATTGTTTATATTGAAGGAGACACTTTGGATGACATTCATAATAAAGCAGCATCTAATGTTGAAGGCCAAACAGTTGAATTAGAAGAGGAGATGATAAGGGGTCTCACTCAGGTTCCTTGGAAGCGTGTGGATGTTAGCTTTCAGAAAAGTAAACAGAGGTTAATTGCTCATAGTACAATTCAGGTGAAAACTTACTGGTTGAATTCTGATGGTGCTGATGTTGTTTACCATATGATAGATAACTTCCTTCTTTAG 1386 0.4322 MLAYDPSFVLRPKAPIPDPNPTRSSLFSSRFSFDPRSWFRPSFAVGPNLSLNSVEMVALRRIGCGCFKNHRLKVEAVSGGEDLFDTATVKPVPYHLVIMVNGIIGSASDWRYAAEQFVKKLPDKVVVHRSECNSSKLTFDGVDTMGERLAEEVLSVIRRWPEVQKISFVAHSLGGLVARYAIGRLYEYSSTLEPLGTNRNCSSEEKTEYSKQLLEQRNEAKIAGLEPMNFITFATPHLGSRGNKQLPFLCGLPFLERSASQTAHLVAGRSGKHLFLMDNDDGKPPLLLQMVDDSDDLKFMSALRAFKRRVAYANANYDRILFVILVLNNGADREIVFMFCYFLTLPEDMVGWRTSSIRRQHELPKSNLLVIDAKYPHIVYIEGDTLDDIHNKAASNVEGQTVELEEEMIRGLTQVPWKRVDVSFQKSKQRLIAHSTIQVKTYWLNSDGADVVYHMIDNFLL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1287 461 Pfam Putative serine esterase (DUF676) 93 320 IPR007751 -
Lal17g1287 461 SUPERFAMILY alpha/beta-Hydrolases 94 320 IPR029058 -
Lal17g1287 461 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN-RELATED 89 320 - -
Lal17g1287 461 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN-RELATED 347 461 - -
Lal17g1287 461 Gene3D alpha/beta hydrolase 94 279 IPR029058 -
Lal17g1287 461 PANTHER UNCHARACTERIZED 347 461 IPR044294 -
Lal17g1287 461 PANTHER UNCHARACTERIZED 89 320 IPR044294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1287 Lal-Chr17 14122523 14135200 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1287 - - gmx:100792195 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1287 17 14122523 14135200 Lal4g1320 4 17308062 17323340 LSH