Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1249 ATGGCGAGCTCAGTGGAGAAGGAAAGTGGTGCTAGCGAAGAAGCCTTCTCTTTAGAGCTACCTGCTCCACTTGGTTGGAAGAAGAAGTTCTCCCCAAAGAAGGCTGGGACCCCGAAGAAAACTGAAATTGTGTTCACTGCGCCAACAGGAGAGGAGATCAGTAATCGGAAGCAGCTGGATCAGTATCTGAAAGCACACCCTGGTGGTCCAGCTGTATCCGAATTTGATTGGGGGACTGGTGAGACCCCAAGAAGATCAGCAAGGATCAGTAAAAAAGTCAAGGCTGCTCCTCGGCTAGAATGTGAGCCTCTGGTGAAACGCGGAAAAAGATCACCAGCTTTGAAAAAAGAAACTTCTGGTGAAGAAAAGGAGGCAAAGGATGTGCAAATGCAAGAAGCTGATGACACTAAGGATGATAAAGGCACAGACGAGGAAAAGAATACTCCAAAGGAAAACCAAGATGAGAAGAGAGTGGAAGATACAGATGTCAAAGAATCAGCTCATTCTGGAGAAGCTAAAGCTGGAGAAAATGTCCAGGTACCGAATGACGAAGGAAAATTTGAGAGTGCTGATGGAGAGCTACATGCATTGAAAGATAAAATTGATGACAAAGGTGCTGAGGGTTCCGAGGTTTCTCAAAATAAAGATGAAGAAAAGATTGGGCAACCACAGAAAGAGGCAAACAAAGATGGTGGATCTGGTGAACCAGAGAAATCGGAAACAGCCCCTGCTGCTGAGGCAAAGGTTGAATTGGTAGGAGAAATCAAGGAAAAAGAAGGAACAAAAGCGAGTAATGAAGAACATCACGAGGTTGATGAGATAAACAAGAGGAACGAAGCGGAATTGGCAATTAACGGTAACCACGGGAGTTGA 873 0.4525 MASSVEKESGASEEAFSLELPAPLGWKKKFSPKKAGTPKKTEIVFTAPTGEEISNRKQLDQYLKAHPGGPAVSEFDWGTGETPRRSARISKKVKAAPRLECEPLVKRGKRSPALKKETSGEEKEAKDVQMQEADDTKDDKGTDEEKNTPKENQDEKRVEDTDVKESAHSGEAKAGENVQVPNDEGKFESADGELHALKDKIDDKGAEGSEVSQNKDEEKIGQPQKEANKDGGSGEPEKSETAPAAEAKVELVGEIKEKEGTKASNEEHHEVDEINKRNEAELAINGNHGS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1249 290 MobiDBLite consensus disorder prediction 186 279 - -
Lal17g1249 290 SUPERFAMILY DNA-binding domain 13 96 IPR016177 GO:0003677
Lal17g1249 290 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11-LIKE 1 288 - -
Lal17g1249 290 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 1 288 IPR039622 -
Lal17g1249 290 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 12 82 IPR001739 GO:0003677
Lal17g1249 290 Pfam Methyl-CpG binding domain 19 81 IPR001739 GO:0003677
Lal17g1249 290 Gene3D - 16 87 - -
Lal17g1249 290 MobiDBLite consensus disorder prediction 65 290 - -
Lal17g1249 290 MobiDBLite consensus disorder prediction 85 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1249 Lal-Chr17 13547850 13552114 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1249 - - gmx:100814375 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1249 17 13547850 13552114 Lal17g1249 17 13547850 13552114 ECH