Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1071 ATGGGGCAAGACAACCTCTCAGCTCAGAAGAGAACCACCACTGCCACCTTGCCCACAACCACCGCAACTAACAGATCCCGCGGCGGCGTTCTGCCACGTGGCCGTCAAATCCAAAAGACTTTCAACAACATTAAGATCACAATCCTGTGCGGCTTCGTCACAATCCTTGTCCTCCGCGGCACAATCGGCGTCAACCTCGGATCCTCCGACGCCGACGCTGTCAACCAGAACCTCGTGGAGGAGACCAACCGTATCCTCGCCGAGATACGATCGGACGCCGATCCCAACGATCCCGATGAGGAAACATTCTTCAACCCCAACATCACGTTCACGCTTGGCCCCAAGATCAAGAATTGGGATCAGGAACGAAAAACATGGTTGGATCAGAACCCTGAGTACCCTAATTTCATCAAAGGTAAACCTCGTGTGTTGCTCCTAACTGGGTCACCACCGAAACCATGTGATAATCCAATTGGGGATCATTACTTGTTGAAATCAATTAAGAACAAGATTGATTACTGTAGATTGCATAACATTGAGATTGTGTACAATTTGGCACATTTGGATAAGGAACTTGCTGGGTATTGGGCCAAATTACCTATGATTAGAAGGTTGATGCTTTCACACCCTGAGATTGAGTGGATTTGGTGGATGGATAGTGATGCACTTTTCACTGATATGGTGTTTGAGCTTCCGTTGTCGAAGTACGATGAGTACAATTTGGTCCTTCATGGGTACCCTGATTTGTTGTTTGAGCAGAAGTCTTGGATCGCGGTCAATACCGGAAGCTTTTTGTTTCGGAATTGTCAGTGGTCATTGGATTTGCTTGATGTTTGGGCTCCGATGGGTCCAAAGGGGCCGGTTCGAGAAGAGGCTGGGAAGATCTTGACAGCGAATCTCAAGGGGAGACCGGCATTTGAGGCAGATGATCAGTCGGCATTGATATACTTGTTGCTATCCCAGAAAGAACAGTGGATGGGTAAAGTGTTTTTGGAGAACTCATTTTATTTGCATGGTTACTGGGCCGGGTTGGTCGACCGGTACGAGGAGATGATGGAGAAGTACCATCCGGGGTTAGGTGATGAGAGGTGGCCATTCGTGACACATTTTGTGGGTTGTAAGCCTTGTGGGAGCTACGGAGATTATCCGGTCGAGAGGTGCCTGAGTAGCATGGAGAGGGCTTTCAATTTTGCAGATAATCAGGTGCTCAAGCTCTACGGCTTTAGGCACCGTGGTCTGTTGAGCCCTAAAATCAAGAGGATCCGAAATGAAACGGTTACTCCTTTGGAGTCTGTAAACCAGTTTGATATAAGAAGACATCCTTTGGAGAACACTGGTTCGAAAAGCTAG 1350 0.48 MGQDNLSAQKRTTTATLPTTTATNRSRGGVLPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLGSSDADAVNQNLVEETNRILAEIRSDADPNDPDEETFFNPNITFTLGPKIKNWDQERKTWLDQNPEYPNFIKGKPRVLLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHNIEIVYNLAHLDKELAGYWAKLPMIRRLMLSHPEIEWIWWMDSDALFTDMVFELPLSKYDEYNLVLHGYPDLLFEQKSWIAVNTGSFLFRNCQWSLDLLDVWAPMGPKGPVREEAGKILTANLKGRPAFEADDQSALIYLLLSQKEQWMGKVFLENSFYLHGYWAGLVDRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLESVNQFDIRRHPLENTGSKS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1071 449 Pfam galactosyl transferase GMA12/MNN10 family 140 378 IPR008630 GO:0016021|GO:0016757
Lal17g1071 449 MobiDBLite consensus disorder prediction 1 27 - -
Lal17g1071 449 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 140 287 IPR029044 -
Lal17g1071 449 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 11 442 IPR008630 GO:0016021|GO:0016757
Lal17g1071 449 MobiDBLite consensus disorder prediction 1 30 - -
Lal17g1071 449 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 11 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1071 Lal-Chr17 9321336 9322685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1071 3 439 Glycosyltransferase AT5G07720 79.911 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1071 K08238 - gmx:100819400 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1071 17 9321336 9322685 Lal17g1071 17 9321336 9322685 ECH