Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1020 ATGGCTACAAAAGAGAACCCAGGAGACAATAGAAACAATAAGAGTTCAATGTATGTTCTCATTATTGTTGGCTTGTGTGCTTTCTTCTATGTATTAGGATTATGGCAACACAGTGGTTTTGGAAAAGGAGACAGAATAGCTGTTGAAATTACTAAGCAAACAGATTGCAGTGTTCTATCTGATCTAAACTATGAGACACACCAAGATGGTGATGCTGGAACACTTGATAGTTCTGATGCAGAACTCAAGGAGTTCAAGCCATGTGATGATCGATACATCGATTACACGCCTTGTCATGATCAAACTCGAGCAATGACATTTCCCAGAGAAAATATGAATTATAGAGAGAGGCATTGTCCTCCTCAAGAAGAAAAATTGTATTGTCTCATAGCTGCACCTAGAGGATATGCAACACCATTTCCATGGCCTCAAAGTCGAGATTATGTTCCATATGCAAATGCGCCTTATAAGAGTCTTACAGTTGAGAAGGCTGTGCAGAATTGGATACAGTATGAAGGGAATGTTTTCAGGTTCCCTGGTGGAGGAACACAGTTTCCTAAGGGAGCTGATGCTTATATTGATGAACTTGCATCTGTTATTCCATTTGATAATGGGATGGTTAGAACTGTATTAGATACTGGCTGTGGGGTTGCTAGTTTTGGCGCGTACCTGTTTAAGAAAAATGTTATTGCAATGTCAATAGCACCAAGGGACTCTCATGAAGCACAAGTTCAATTTGCTTTGGAAAGAGGTGTTCCAGCAATAATTGGTGTTATTGGGACTATAATGCTGCCTTTCCCTTCTGGAGCCTTCGACATGGCACATTGTTCTCGCTGTTTGATTCCATGGGGTGCAAATGATGGAATGTACATGAAGGAAGTTGACAGAGTTCTTAAGCCTGGTGGTTACTGGGTACTTTCTGGACCTCCTATCAACTGGAAGACTAGCTACCAAGCATGGCAGCGTCCCGCAGAGGAGCTTGATGAGGAGCAAAGGAAGATTGAGGATGTTGCTAAACTTCTTTGCTGGGAGAAGAAACATGAGAAGGGTGAAATCGCTATCTGGCAAAAAAGAGTGAATAGTGATGAATGCAGTGAAGATACTCAATCTACAATATGTCAATCAACTAATGCTGATGATGTCTGGTACAAGAAGATGGAGAACTGTGTAACTCCTTCTAAAGATAGTGGTCTTTGGAAGCCTTTCCCTGAGAGACTCAATGCTGTTCCTTCCAGAATAAGCAGTGGATCCGTTCCGGGTGTATCTGTGGAGGTATTTGAGAAGGACAATCGATTATGGAAGAAGCATGTGAATGCTTACAAGCGGGTCAACAAAATCCTCGAGTCGGGGAGGTATCGCAACATCATGGACATGAATGCTGGTTTGGGAAGTTTTGCTGCAGCACTAGATTCTCCCAAATCATGGGTTATGAATGTTCTGCCAACAATTGCTGAGAAAACTAATCTAGGTGTTATATTCGAGCGTGGATTGATTGGCATTTATCACGATTGGTGTGAAGCCTTCTCTACATATCCAAGGACTTATGACCTTATCCATGCAAATGGTCTTTTCAGCTTGTACAAGAATGAGTGTAGTGCAGAAGACATTCTATTGGAGATGGACCGAATTTTACGGCCCGAAGGAGCAGTAATATTCCGAGATCAAGCAGAAGTGCTAGTGAAGGTGAGAAGAATTGTGAGAGGAATGAGATGGAATACAAAAATGGTGGATCATGAGGATGGTCCACCAATTTCAGAGAAAATGTTGTTTGCTGTGAAAAGGTATTGGGTTGCAGGTGACAATAACACAAGCTCAGATTGA 1821 0.4185 MATKENPGDNRNNKSSMYVLIIVGLCAFFYVLGLWQHSGFGKGDRIAVEITKQTDCSVLSDLNYETHQDGDAGTLDSSDAELKEFKPCDDRYIDYTPCHDQTRAMTFPRENMNYRERHCPPQEEKLYCLIAAPRGYATPFPWPQSRDYVPYANAPYKSLTVEKAVQNWIQYEGNVFRFPGGGTQFPKGADAYIDELASVIPFDNGMVRTVLDTGCGVASFGAYLFKKNVIAMSIAPRDSHEAQVQFALERGVPAIIGVIGTIMLPFPSGAFDMAHCSRCLIPWGANDGMYMKEVDRVLKPGGYWVLSGPPINWKTSYQAWQRPAEELDEEQRKIEDVAKLLCWEKKHEKGEIAIWQKRVNSDECSEDTQSTICQSTNADDVWYKKMENCVTPSKDSGLWKPFPERLNAVPSRISSGSVPGVSVEVFEKDNRLWKKHVNAYKRVNKILESGRYRNIMDMNAGLGSFAAALDSPKSWVMNVLPTIAEKTNLGVIFERGLIGIYHDWCEAFSTYPRTYDLIHANGLFSLYKNECSAEDILLEMDRILRPEGAVIFRDQAEVLVKVRRIVRGMRWNTKMVDHEDGPPISEKMLFAVKRYWVAGDNNTSSD 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1020 606 CDD AdoMet_MTases 209 307 - -
Lal17g1020 606 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 331 IPR029063 -
Lal17g1020 606 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 94 593 IPR004159 GO:0008168
Lal17g1020 606 PANTHER METHYLTRANSFERASE PMT2-RELATED 6 601 - -
Lal17g1020 606 Gene3D Vaccinia Virus protein VP39 162 365 IPR029063 -
Lal17g1020 606 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 440 588 IPR029063 -
Lal17g1020 606 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 6 601 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1020 Lal-Chr17 8396981 8403381 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1020 - - gmx:100807547 1095.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1020 17 8396981 8403381 Lal17g1020 17 8396981 8403381 ECH