Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1012 ATGCTGAGTTCACTCTTCTGTTCTGATTTTTGGGTATCTGCATATTTAAGGGCTATGATTTTTTATGTCAGATCTCTTTCTGCATGTGCTAGATTCTTTGCCAAATCTGGGTTGTACAGGAATTGTGCATGCATTTTCAAGTTGATTATTTCCAAAGACATGTTGGAGGGTCCATCCTTTCTCATTGCAAGGGACTTACCAAGCTCATGTGAGCAAGAGACTGAGTGGATTTACAATAGTTTACGTGTGATGGAGCTTGTGAACAACAAGCGTCGACTGGAACTGGAGGAAGAAGCTGTGCTGCGAAAGTCTCGCCGACTTTCAGTTCTTCCTAAGGGAGGAGAAGAAGGGGAACCACAGATGACTGTCCTTGATCTTTCCCTTTCGCTTAACTTTAACCAAGGGAATGACCAAAACAATGCAAGTGATCAATCAGACTCAGATGGCCTTATCCGTCAACTCGGTCGGGACATCTCTATTAATTGTATCATACGCTGTTCAAGGTCTGACTATGGCTTGGTTGCCTTATTGAACAAGAGTTTTCGATCTCTTATTAGGAGTGGAGAGATTTATAGGCTGAGGCGGCAGGTGGGTAGGATAGAACATTGGGTTTACTTCTCTTGTAATCTTCCTGAATGGGAGGCGTATGATCCAAACCGTGGTCGGTGGATGCACTTGCCTAGGATGCCTTCGAATGAGTGTTTTATATGTTCCGATAAGGAGTCGTTGGCTGTTGGCACAGAGCTTCTTGTTTTCGGGAAGGAAATAATGTCTCCTGTCATTAACAGATATAGCATTTTGAACAACACATGGTCATCTGGTATGCAAATGAATGTTTCCAGATGCTTGTTTGGTTCTGCCAGCCTTGGAGAACTCGCCATATTAGCTGGTGGTTGTGATCTCCGTGGGAACATCTTGAGCTCAGCTGAGCTTTATAACTCGGAAACCGGAACCTGGGAACTTCTTCCAGACATGAATAAAGCAAGGAAAATGTGTTCTGGTGTATTTATAGATGGGAAGTTTTATGTCATTGGTGGAATTGGATTAGGCAACTCAAAGCAGCTAACATGTGGTGAGGAGTTTGATCTGGAAACAAGAAAGTGGCGTGAAATACCCAACATGTTCCCTAGGCGAAACGGAGGACCTGGGGTGAATGAGGTACCAGCTACTGTCGAGGCACCTCCGTTAGTTGCAGTTGTAAATAATATATTGTATGCAGCAGATTATGCAAAGCAGGAAGTCAGGAGATACTACAAAGATACTAACTCTTGGGTCACAGTCGGAAGATTGCCCGAGCGGGTAGTCTCAATGAATGGCTGGGGTTTAGCCTTTCGAGCATGTGGGGATCGGCTAATTGTTGTTGGCGGGGCAAGGGCTACGGATCGAGGGGTGATCGAGGTTAATGCTTGTTTCCCAGGTGATGGTGCACTCCAGTGGAACATGCTTGCCAGCAAACAATCAGGGAGCTTTGTATATAATTGCGCCGTGATGGGATGTTGA 1500 0.45 MLSSLFCSDFWVSAYLRAMIFYVRSLSACARFFAKSGLYRNCACIFKLIISKDMLEGPSFLIARDLPSSCEQETEWIYNSLRVMELVNNKRRLELEEEAVLRKSRRLSVLPKGGEEGEPQMTVLDLSLSLNFNQGNDQNNASDQSDSDGLIRQLGRDISINCIIRCSRSDYGLVALLNKSFRSLIRSGEIYRLRRQVGRIEHWVYFSCNLPEWEAYDPNRGRWMHLPRMPSNECFICSDKESLAVGTELLVFGKEIMSPVINRYSILNNTWSSGMQMNVSRCLFGSASLGELAILAGGCDLRGNILSSAELYNSETGTWELLPDMNKARKMCSGVFIDGKFYVIGGIGLGNSKQLTCGEEFDLETRKWREIPNMFPRRNGGPGVNEVPATVEAPPLVAVVNNILYAADYAKQEVRRYYKDTNSWVTVGRLPERVVSMNGWGLAFRACGDRLIVVGGARATDRGVIEVNACFPGDGALQWNMLASKQSGSFVYNCAVMGC 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1012 499 Coils Coil 83 103 - -
Lal17g1012 499 Pfam Kelch motif 328 374 IPR006652 GO:0005515
Lal17g1012 499 Pfam Kelch motif 280 326 IPR006652 GO:0005515
Lal17g1012 499 SMART kelc_smart 292 339 IPR006652 GO:0005515
Lal17g1012 499 SMART kelc_smart 340 387 IPR006652 GO:0005515
Lal17g1012 499 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 54 499 - -
Lal17g1012 499 Gene3D - 198 490 IPR015915 GO:0005515
Lal17g1012 499 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 54 499 - -
Lal17g1012 499 SUPERFAMILY Kelch motif 209 490 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1012 Lal-Chr17 8319310 8321867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g1012 151 332 EF-hand Containing Proteins AT4G39560 29.798 2.77e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1012 - - gmx:100788507 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1012 17 8319310 8321867 Lal17g1012 17 8319310 8321867 ECH