Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0975 ATGAAGAAGAAGTTCGAAACATTAGTATCCTTAACAAGAAAACGGTCGATTCAGTTTCTAATCGGAGTTACGGTTTTGTACCTTGTCCTATTCACGGTCGAAATCCCTTTCGTTTTTCGAACCGGGTTCGGTTCAATAACCCAAGACTTCGTTACAACACAACACCTTTCAAGGCTTCTCAGCGAAGAGAATCTTCTACAAAAAGAAGCACCCACTCGCCCCTTCAAGCGCGTTTCCCAAAACGCCGTACTCGGACCGAGTCAACTCAGTCGCCGGGAACTCAAACTCGTTTCCGGTTTAGTCTTCGACGACACCACTTTCGACGCAACCCGAAAATACGGCTCCTCCGAGCTCTATAAGGTAGCTAAGCACGCACTCGATTCGGGTTTGACGCTCTGGGAAGAGCTCAAATCGGGTAAAATAAAAACCGTTATAGAAAAACCAGAGAACCGGACCGAGTCATGTCCCGGTTCAATTGCTGTTCCCGGTTCAGGATTTTCGGGTGTGGTGGCGATTCCTTGTGGGATGACTTTGGGGTCGCATGTGACTGTGGTGGCGAAACCTAAGCCTGCGCGGGCTGTATTTGATTCGAGGGTATCGATGGTGAAGCCGATTATGGTGTCACAGTTTATGGTGGAGCTGCAAGGGTTGGAGACGGTGGATGGGGAAGAACCACCTCGGATTTTTTATTTTAATCCGAGGTTGAAGGGTGATTGGAGTTGGAAACCAGTGATTGAGCTTAACACGTGTTATCGGATGCAGTGGGGTACCTCGCTTCGATGTGATGGTTGGAAATCAAATGCTGATGAAGATACTGTTGATGGGTTGGTGAAATGTGAGAAGTGGATTCGGGATGACGAAAATCACGAAGAGCAGTCTAAGGCAACATGGTGGTTGAGTAGACTGATAGGCCGCACGAAAAAAGTAACAGTTGACTGGCCATTCCCATTTTCTGAGGATAAGCTATTTGTTCTTACACTTAGTGCTGGATTGGAAGGTTATCATGTTACTGTTGACGGGAGGCACATTGTCTCTTTTCCTTATCGCACTGGCTTTACTCTTGAGGATGCCACTGGGCTTTCTTTGGGTGGAGACATTGATGTCCACTCTATATTTGCCGCCTCTTTGCCTTCAACACATCCCAGTTTTGCCCCACAGCGGCATCTTGAATTGTCGACAAGATGGCTTGTTCCTCCACTTCCTGAATCTGGAGTAGAATTGTTCATTGGTATCCTTTCTGCTGGAAACCATTTTGCTGAAAGGATGGCTGTAAGGAAGTCATGGATGCAGCATAGGCTTATTAAATCTTCAAAAGTTGTTGCTCGTTTCTTTGTAGCACTGAACTCAAGAAAGGAAGTTAATGCAGAGTTGAAGAAGGAAGCAGAATTTTTTGGCGATATTGTTATAGTGCCTTACATGGATAATTATGACCTAGTGGTGCTGAAAACAGTGGCCATATGTGAATATGGGGTTCACACAGTTTCTGCCAAGTATATCATGAAGGGTGATGATGACACTTTTGTACGAGTGGATGCTGTTGTTGATGAAGCAAGGAAGGTTCCACATGACATGACCTTCTATATTGGGAACATTAATTACTACCACAAACCCATGCGCTATGGTAAATGGGAGGTGACATATGAGGAATGGCCAGAAGAGGACTACCCACCCTATGCTAATGGACCGGGTTATATTATCTCGGCCGACATTGCACGCTACATCGTTTGTGAGTTTGAGATGCATAAATTAAGGTTGTTTAAGATGGAAGATGTGAGTATGGGGATGTGGGTGGAGCAATTTAACAGCTCGAAGCCCGTAATATACATACATAGCTTAAAGTTTTGCCAGTTTGGTTGCATAGAAGACTATCACACGGCACACTACCAATCGCCGAGGCAGATGCTGTGCCTGTGGGATAAATTGCAAAAGCAGACAAGGCCTCAATGTTGCAACATGAGATAG 1962 0.4546 MKKKFETLVSLTRKRSIQFLIGVTVLYLVLFTVEIPFVFRTGFGSITQDFVTTQHLSRLLSEENLLQKEAPTRPFKRVSQNAVLGPSQLSRRELKLVSGLVFDDTTFDATRKYGSSELYKVAKHALDSGLTLWEELKSGKIKTVIEKPENRTESCPGSIAVPGSGFSGVVAIPCGMTLGSHVTVVAKPKPARAVFDSRVSMVKPIMVSQFMVELQGLETVDGEEPPRIFYFNPRLKGDWSWKPVIELNTCYRMQWGTSLRCDGWKSNADEDTVDGLVKCEKWIRDDENHEEQSKATWWLSRLIGRTKKVTVDWPFPFSEDKLFVLTLSAGLEGYHVTVDGRHIVSFPYRTGFTLEDATGLSLGGDIDVHSIFAASLPSTHPSFAPQRHLELSTRWLVPPLPESGVELFIGILSAGNHFAERMAVRKSWMQHRLIKSSKVVARFFVALNSRKEVNAELKKEAEFFGDIVIVPYMDNYDLVVLKTVAICEYGVHTVSAKYIMKGDDDTFVRVDAVVDEARKVPHDMTFYIGNINYYHKPMRYGKWEVTYEEWPEEDYPPYANGPGYIISADIARYIVCEFEMHKLRLFKMEDVSMGMWVEQFNSSKPVIYIHSLKFCQFGCIEDYHTAHYQSPRQMLCLWDKLQKQTRPQCCNMR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0975 653 Pfam Galactosyltransferase 420 600 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lal17g0975 653 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE GALT5 6 653 - -
Lal17g0975 653 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 6 653 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lal17g0975 653 SUPERFAMILY Concanavalin A-like lectins/glucanases 170 372 IPR013320 -
Lal17g0975 653 Pfam Galactoside-binding lectin 170 372 IPR001079 GO:0030246
Lal17g0975 653 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 168 374 IPR001079 GO:0030246
Lal17g0975 653 SMART Gal_bind_lectin_2 172 373 IPR001079 GO:0030246
Lal17g0975 653 CDD GLECT 169 372 IPR001079 GO:0030246
Lal17g0975 653 Gene3D - 402 648 - -
Lal17g0975 653 Gene3D - 166 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0975 Lal-Chr17 7917748 7922024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0975 4 653 Glycosyltransferase AT1G74800 61.862 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0975 K20843 - gmx:100816777 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1550 14 16184288 16187660 Lal17g0975 17 7917748 7922024 ECH
Lal17g0975 17 7917748 7922024 Lal17g0975 17 7917748 7922024 ECH
Lal14g1550 14 16184288 16187660 Lal17g0975 17 7917748 7922024 PCT
Lal17g0975 17 7917748 7922024 Lal14g1550 14 16184288 16187660 PCT