Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0965 ATGCAATCTCTTTCTCTAACTTTGAGCAAGAGGCTCTCGAATTCTAATCCTCTCTTTAGAATCTCATCCAATCTCGTCCCCTACGCATCATCATCAACCACCGCCTCATCGCCTCCACCGAATTCATCACCTTCGCCGATATCCGCCGCTAACGGCAGCTCCAACAATTTTCTTACTGCTACGTGGTCCGCAAATCAAAGCCGCGGCATCACAGGTTTCGGATCTGACGTTAGAGTTGGAGATCTCATCGAAAGTCGAGGACGTGCTTATGAGGTTCTTAAACAATATCACTCTCTCGGAGCAAAAACCACTATCAAGGTTCCATCTCAAACTGTAGCTGGTTATGCCACTGTTGCTACTACAGGGGGTGTCGAGAGAAGGAAGGAAGGAAACACTGGCCCGAAGACAAAGAGAGAGCAGCTCCTAAAAGCTACTGCACTTGTTCCACTTCTTCTGATATACCCAAATGCCTATTCCCTGCTCGCCGCAAATCTCTTTGTATTCTGGCACATTCGTGCCGGGATCGAAGAGATCTTGGCTGATTATGTTCACCAGGAAATGACCCGAGAATTCGTAATGATTTCTTTCAAACTCTTCCTCATAATCGCAATGAAGGATGTTTTTTTGAAATTTGTATTTGTATAA 645 0.4543 MQSLSLTLSKRLSNSNPLFRISSNLVPYASSSTTASSPPPNSSPSPISAANGSSNNFLTATWSANQSRGITGFGSDVRVGDLIESRGRAYEVLKQYHSLGAKTTIKVPSQTVAGYATVATTGGVERRKEGNTGPKTKREQLLKATALVPLLLIYPNAYSLLAANLFVFWHIRAGIEEILADYVHQEMTREFVMISFKLFLIIAMKDVFLKFVFV 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0965 214 PANTHER SUCCINATE DEHYDROGENASE SUBUNIT 4, MITOCHONDRIAL 2 213 - -
Lal17g0965 214 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 142 213 IPR034804 GO:0016020
Lal17g0965 214 MobiDBLite consensus disorder prediction 29 50 - -
Lal17g0965 214 PANTHER SUCCINATE DEHYDROGENASE SUBUNIT 4, MITOCHONDRIAL 2 213 IPR044963 GO:0005743|GO:0005749|GO:0006099|GO:0006121
Lal17g0965 214 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 156 204 IPR034804 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0965 Lal-Chr17 7816783 7824129 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0965 K25801 - gmx:100500565 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0965 17 7816783 7824129 Lal21g0712 21 5719594 5722900 LSH