Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0924 ATGTTATCTCAAACACTCTACTTCTCTTCTATATCACTTCCTCCTTTGGGCACAAAACACACCAAACAACTCAAAATGAGTATTCATCACTTCATCTACTTGTTCTTGTTCTTCTCACTCTCATCTTTCCATGTTTCTCAAGCAGCAATAACTACAACAACACAACAACATTTCAAGACAAATATTAACCCATTCACTCCCAAAGCCTCTCTCATTCGTTACTGGAACACCCATGTTTCAAATAAACACCCAATCCCTCATTTTCTTCTCTCTAAAGCTTCCCCTCTAACCCCACAACACTATGCAATTCTCAACAATCTTCTCACTAACAATCCCTTCTCTTCACAATCCCACTATTCCTTATGCACCATACCAAACTTATTCTGTTCTTTCGACCAAAACACACCTCAATTATTCTCTGATGCGACAAAAGACAATGCAAATTTCGCTGTATACTCAAACAAACACTTTGGAAACTACGGATCCTCAAGAGTTTCTGGAACTGACTCATTCAAAAACTACTCCAATGGGTTGAACACAATCAACGACTCGTTCAAGAAATATAGTACGAGCTCGACCCATCACGGTAACCAGTTCAGTAACTATGCAGAAAACGGCAATGTAGCAAACGCTAACTTCACCAGCTACGGTTCTGGAGCCACCGCTGTCTCCGGCGGCTTCGATAACTACGATAAGTTTGGTAATGTTCCTAATCTCCGTTTCACCACCTATGACTCCGCCGCAACGGATCATAAACTCTCTTTCTCTAGTTATGGCAATGAAACTAACGCTGGAACACAATCGTTCACGAGCTATGGGAAGAGGGTGCGTGGAGGAACTAGTGAGTTTACAAACTATGCTGTTAGCACTAACATACTCCAATCCGGGTTCACAAGTTATGGTGAATTAGGTACCAAAGCTAGCAACGACTCTTTCAAGTTCTATAGCTCCTCCGGCAACAACCCTCAAAGCAACTTCCAAACCTACGGCGCCGGCTCTATCTCCGGCACAGATTCGTTCACTAGTTACCGGAACAGTGCAAATGTCGGTTCAGATTCGTTCCAAAGCTACGCCGCAAAATCTAACTCCGGCACCGCCACGTTCACCAACTACGGCAAATCCTTCAATCTAGGAAACGATAGTTTCAAGGAATACGGAAAAGGGTCAAAAGGTCATTCCACATTCGAATTCAAGTCCTACGATTTGGGCCGCGATTTTAAAGAGTACAACAAGCAAGGCGCGTCGTTTTCTCAGTACCACAATTTCACCCCATCTAGTGGCAAAATCGTGAATAAGTTAATCGAGGAGGGTAAATTTTTCAGGGAGTCAATGTTAAAAGAAGGAAAAATCATAATAATGCCAGACATTAACGATAAAATGCCTCAAAGGTCATTTCTACCCTTATCTATTTCATCGAAATTACCATTCTCAACGTCAAGGTTGACCGACATAAAAGAAATGTTTCAAGTGCATGAAGGATCCGCGACAGAGCGCGTGATATTAAACGCGCTGAGAGAATGTGAGAGAAATCCAAGCATAGGTGAAACAAAACGGTGCGTTGGATCAGCAGAGGGTATGATTAACTTTGCAGTATCAGTGTTGGGTCCTAGTGTAATGGTTAGAACCACTGAGAGTGTGAATGGGTCAAAGAAGAGTGTAATAACTGGAAGAGTAATTAGTGTGAACAATGGAAAAGTGACGAAATCAGTTTCATGTCATCAAAGTTTGTACCCTCACTTACTATATTATTGTCACTCTGTTCCTAAAGTGAGAGTGTATGAAGTTGATATTCTTGACATGGACACTAAGGTGAAGATTAATCATGGGGTTGCAATTTGTCACCTGGACACGTCATCATGGGGCCCACAACATGGGGCATTCTTGGCATTAGGGTCTAGACCTGGAAAAATTGAGGTTTGCCATTGGATTTTTCAGAATGATATGACTTGGACAATTGGAAGTTTTTGA 1968 0.4187 MLSQTLYFSSISLPPLGTKHTKQLKMSIHHFIYLFLFFSLSSFHVSQAAITTTTQQHFKTNINPFTPKASLIRYWNTHVSNKHPIPHFLLSKASPLTPQHYAILNNLLTNNPFSSQSHYSLCTIPNLFCSFDQNTPQLFSDATKDNANFAVYSNKHFGNYGSSRVSGTDSFKNYSNGLNTINDSFKKYSTSSTHHGNQFSNYAENGNVANANFTSYGSGATAVSGGFDNYDKFGNVPNLRFTTYDSAATDHKLSFSSYGNETNAGTQSFTSYGKRVRGGTSEFTNYAVSTNILQSGFTSYGELGTKASNDSFKFYSSSGNNPQSNFQTYGAGSISGTDSFTSYRNSANVGSDSFQSYAAKSNSGTATFTNYGKSFNLGNDSFKEYGKGSKGHSTFEFKSYDLGRDFKEYNKQGASFSQYHNFTPSSGKIVNKLIEEGKFFRESMLKEGKIIIMPDINDKMPQRSFLPLSISSKLPFSTSRLTDIKEMFQVHEGSATERVILNALRECERNPSIGETKRCVGSAEGMINFAVSVLGPSVMVRTTESVNGSKKSVITGRVISVNNGKVTKSVSCHQSLYPHLLYYCHSVPKVRVYEVDILDMDTKVKINHGVAICHLDTSSWGPQHGAFLALGSRPGKIEVCHWIFQNDMTWTIGSF 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0924 655 PANTHER POLYGALACTURONASE-1 NON-CATALYTIC SUBUNIT BETA 31 652 - -
Lal17g0924 655 Pfam BURP domain 439 651 IPR004873 -
Lal17g0924 655 ProSiteProfiles BURP domain profile. 439 653 IPR004873 -
Lal17g0924 655 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 31 652 - -
Lal17g0924 655 SMART BURP_2 437 653 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0924 Lal-Chr17 7352327 7355840 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0924 - - gmx:100784264 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0924 17 7352327 7355840 Lal17g0924 17 7352327 7355840 ECH