Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0918 ATGGCAACACGGTCATCTGAACCAGCCACAGAAGAACCTAAGAAGCTTATCAGAGATGAGGTTACTACTGAGTTGAATGAACATAGTTTGCCTCCATTTGACCCTGATGTGCAGAGGATCATATATGGCTTCACTTACTTTAAGCTCAACAACTTCGACAAAAATCCTGAGCTTTACAAAGAACTTGCTCTCCACCAATCCCCAAGGTTTTTGATATTTGCTTGTTCTGACTCTCGAGTGAGTCCTGATGTTATCCTGAACTTTCAACCTGAAGAAGCTTTCTCGGCCCGCAACATTGCTAACATGGTTCCTACATATAATCAGAGGGACAATGGAGTTGGTGCAATAATTGAGTATGCCATCGAAGCTCTTAAGGTATCAAACATTCTGATAATTGGACATAGTAAGTGTGGTGGAATAAAAAGGCTCATGAGTCATCCAGAGGATGGTTCTCCTGATTATGATTTCATAGATGATTGGCTGAAAATTGGTTTACCTGCCAAAATCAAGGTTCTGGAAGAACACCCACATGCTAATTTTGAAAAACAATGCGAATTATGTGAAAAGGAGTCAGTGAATAACTCCATAGTGAACCTGAAGACATATCCATTTGTTAAAAAAGGAGTGTGTGACAAGAGTTTGAAGATATTGGGTAGTTACTATGATTTTGTGAATGGAAAATTTGAGCTTTGGGAGTATAATTCTGAATCAATTACCATTCCTTTCTCATCACCAAAATGA 741 0.3887 MATRSSEPATEEPKKLIRDEVTTELNEHSLPPFDPDVQRIIYGFTYFKLNNFDKNPELYKELALHQSPRFLIFACSDSRVSPDVILNFQPEEAFSARNIANMVPTYNQRDNGVGAIIEYAIEALKVSNILIIGHSKCGGIKRLMSHPEDGSPDYDFIDDWLKIGLPAKIKVLEEHPHANFEKQCELCEKESVNNSIVNLKTYPFVKKGVCDKSLKILGSYYDFVNGKFELWEYNSESITIPFSSPK 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0918 246 Pfam Carbonic anhydrase 71 227 IPR001765 GO:0004089|GO:0008270
Lal17g0918 246 PANTHER CARBONIC ANHYDRASE 19 236 - -
Lal17g0918 246 SMART Pro_CA_2 63 232 IPR001765 GO:0004089|GO:0008270
Lal17g0918 246 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 75 82 IPR015892 GO:0004089|GO:0008270|GO:0015976
Lal17g0918 246 SUPERFAMILY beta-carbonic anhydrase, cab 30 237 IPR036874 GO:0004089|GO:0008270
Lal17g0918 246 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 118 138 IPR015892 GO:0004089|GO:0008270|GO:0015976
Lal17g0918 246 Gene3D Carbonic anhydrase 31 240 IPR036874 GO:0004089|GO:0008270
Lal17g0918 246 PANTHER CARBONIC ANHYDRASE 19 236 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0918 Lal-Chr17 7251765 7253661 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0918 K01673 - gmx:547671 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0918 17 7251765 7253661 Lal17g0918 17 7251765 7253661 ECH