Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0915 ATGGCTGGACTTGTAGAAGAAGAGGATCAAAAACAAATTTTTATTGGAATTGACAAAAAAGAAGAGAGTGAGGATAATTACAAAAATAAGAAAAGCAAGGATCATAATCATAACAATAGTACATTGGTCAAGGAGAAAGAAGAAGAGAGTGAGAGTGGTCAAGGGAAAAGAGACATGGCTCCACCATCAGGGAATTCTTGTATCCATAGGTCCAGTTCTAGGCCTCAACTTGATGTCAGCAAAGCTGAGATTCAAGGGAATTCAGAAGAAAAGGATCCAACCATTTTGTTGCCTAATCAATCTGATGATTTATTTCACTTGGCTCTTGACATTGGAGGATCTCTGATAAAGTTGGTTTACTTTTCAAGGCATGAGGACCAATCAGCTAATGATAAAAGGAAGAGAAGTGTGAAGGAGCGACTGGGACTTTCTAACAGTAATAGGAGAAGCTACCCTATTCTTGGTGGGAGGCTTCACTTTGTGAAATTTGAGACAAGAAAGATTAATGAGTGCTTAGATTTCATATCTTCAAAGCAGCTTCATTGTGGTGGTTTGGAATCACATTATACTGATGCTGACCAGAATGCCATAATTAAGGCTACTGGTGGTGGAGCATACAAGTATGCTGATCTTTTCAAAGAAAGACTCGGGGTCAGTCTTGACAAAGAAGATGAAATGGATTGTCTTGTGGCAGGTGCAAATTTCTTGCTAAAGGCAATTCGTCATGAAGCTTTCACACACATGGAGGGCCAGAAAGAGTTTGTTCAAATTGACCCTAATGATTTGTACCCTTATCTTCTAGTTAATATTGGATCTGGTGTTAGTATGATCAAGGTTGACGGGGAAGGAAAATTCGAAAGGGTTAGTGGGACAAATGTTGGTGGCGGTACTTACTGGGGTTTGGGGATACTGTTAACGAAGTGCAAGAGCTTTGATGAATTGCTTGAGCTGAGTCAGAAAGGAGATAATAGTAATATTGATATGCTCGTTGGGGACATTTATGGTGGTTTGGACTATTCTAAGATTGGCCTATCAGCGTCTACTATTGCTTCAAGTTTTGGCAAAACTATATCAGAAAAAAAGGAGCTTGCAGACTACAGACCTGAAGATATATCACTCTCTCTTTTACGGATGATTTCATACAATATTGGTCAAATAGCTTATTTGAATGCATTGCGATTTGGGTTGAAGCGTATCTTTTTTGGAGGATTTTTTATAAGGGGTCATGCCTATACCATGGACACTATTTCTTTTGCAGTTCACTTCTGGTCAAAAGGGGAAGCAAAAGCTATGTTCTTGCGACATGAAGGATTTCTAGGAGCTTTAGGTGCATTTATGAGCTATGAAAAGCATGGTTTAGATGACCTCATGGTTCATCACTTGGTTGAAAGGTTCCCAATAGGTGCCCCATATACAGGAGGCAAAATACATGGCCCACCACTTGGAGATTTGAATGAGAAGATTTCGTGGATGGATAAATTCTTGCAGAAGGGAAATGAGATTACTGCACCTGTCCCAATGACTCCAACTGCTGGAACTACTGGACTTGGGGGTTTTGAAGTTCCTTTGTCAAAAGGAAGTACTCTGCGACCTGATGCAAGTGCTCTGAATGTTGGTGTCCTCCATCTAGTACCAACTCTGGAGGTGTTTCCATTACTAGCAGACAAAAAAACGTATGAACCCAACACAATTGATCTCTCAGATCCCAGTGAACTAGAATATTGGCTCAAAGTTTTGTCAGACCACTTGCCAGATCTTATGGACAAGGCTATCGCAAGTGAAGGTGGAACTGATGATGCGAAAAAAATGGGTGATGCTTTTGCTCGTGCATTTTCTGCTCACTTGGCAAGGTTGATGGAGGAGCCTAATGCATATGGGAAATTAGGCCTGGCGAATCTATTGGAAATGAGGGAAGAGTGCTTGAGGGAATTCCAGTTTGGTGATGTCTATAGAAGTATCAAGCAAAGGGAAAATGAGGCATCACTTGCTGTTTTACCTGACTTGTTGACGGAGCTTGACAGAATGGATGAGAATACTAGGCTGCTTACTCTAATTGAAGGAGTTCTTGCTGCAAACATTTTTGACTGGGGTTCTGGTGCATGTGTGGATCTCTATCATAAAGGAACTATTATTGAAATTTACAGAATGAGTCGCAATAAGATGCAGAGACCTTGGCGAGTGGATGATTTTGACGCCTTCAAAGAGAGAATGTTAGGGGCTAAGAAAATGCCCCCTCATAGAAGAGCTTTACTTTTTGTTGATAATTCAGGTGCTGACATTGTTCTAGGGATGCTTCCTCTGGCAAGGGAGCTCCTCCGCCGTGGAACTGAAGTAGTTCTGGTTGCGAACTCACTTCCTGCTTTAAATGATGTGACTGCAAGGGAGCTTCCTGATATTGTAGCTGAGGCTGCCAAGCATTGTGACATTCTAAGGAGAGCTGCTGAAGCTGGAGGCTTGCTTGTGGATGCAATGATCAATAACTCAGACAGCTTAAACGAAAATTCACCTTCGGTCCCCTTGATGGTTGTTGAAAATGGCTGCGGTAGTCCGTGTATTGACCTTAGACAGGTCAGCTCTGAGCTCGCTGCAACCGCAAAAGATGCAGATTTGATAATTTTGGAAGGGATGGGTAGAGCTCTTCATACCAACCTTAATGCTCGGTTTAAATGTGATGCGTTGAAGCTTGCAATGGTGAAAAATCAGAGATTGGCTGAAAAGCTGGTTAAAGGGAACATATATGACTGCATTTGCAAGTATGAGCCTTCAAGTTGA 2772 0.4163 MAGLVEEEDQKQIFIGIDKKEESEDNYKNKKSKDHNHNNSTLVKEKEEESESGQGKRDMAPPSGNSCIHRSSSRPQLDVSKAEIQGNSEEKDPTILLPNQSDDLFHLALDIGGSLIKLVYFSRHEDQSANDKRKRSVKERLGLSNSNRRSYPILGGRLHFVKFETRKINECLDFISSKQLHCGGLESHYTDADQNAIIKATGGGAYKYADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDPNDLYPYLLVNIGSGVSMIKVDGEGKFERVSGTNVGGGTYWGLGILLTKCKSFDELLELSQKGDNSNIDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELADYRPEDISLSLLRMISYNIGQIAYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVHFWSKGEAKAMFLRHEGFLGALGAFMSYEKHGLDDLMVHHLVERFPIGAPYTGGKIHGPPLGDLNEKISWMDKFLQKGNEITAPVPMTPTAGTTGLGGFEVPLSKGSTLRPDASALNVGVLHLVPTLEVFPLLADKKTYEPNTIDLSDPSELEYWLKVLSDHLPDLMDKAIASEGGTDDAKKMGDAFARAFSAHLARLMEEPNAYGKLGLANLLEMREECLREFQFGDVYRSIKQRENEASLAVLPDLLTELDRMDENTRLLTLIEGVLAANIFDWGSGACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDAFKERMLGAKKMPPHRRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTARELPDIVAEAAKHCDILRRAAEAGGLLVDAMINNSDSLNENSPSVPLMVVENGCGSPCIDLRQVSSELAATAKDADLIILEGMGRALHTNLNARFKCDALKLAMVKNQRLAEKLVKGNIYDCICKYEPSS 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0915 923 PANTHER PANTOTHENATE KINASE 2 48 845 - -
Lal17g0915 923 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 726 921 - -
Lal17g0915 923 Gene3D - 560 647 IPR035073 -
Lal17g0915 923 SUPERFAMILY Actin-like ATPase domain 105 243 IPR043129 -
Lal17g0915 923 Pfam Damage-control phosphatase ARMT1-like domain 632 909 IPR002791 -
Lal17g0915 923 PIRSF PanK_long 59 923 IPR015844 GO:0004594|GO:0015937
Lal17g0915 923 MobiDBLite consensus disorder prediction 65 83 - -
Lal17g0915 923 MobiDBLite consensus disorder prediction 1 95 - -
Lal17g0915 923 Gene3D - 99 256 - -
Lal17g0915 923 SUPERFAMILY Actin-like ATPase domain 215 448 IPR043129 -
Lal17g0915 923 TIGRFAM panK_eukar: pantothenate kinase 106 447 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lal17g0915 923 Pfam Fumble 106 446 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lal17g0915 923 Gene3D - 325 437 - -
Lal17g0915 923 SUPERFAMILY AF1104-like 540 921 IPR036075 -
Lal17g0915 923 PANTHER PANTOTHENATE KINASE 48 845 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lal17g0915 923 MobiDBLite consensus disorder prediction 11 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0915 Lal-Chr17 7076360 7093945 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0915 K24265 - gmx:100781580 1571.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1516 14 15989217 16001826 Lal17g0915 17 7076360 7093945 ECH
Lal17g0915 17 7076360 7093945 Lal17g0915 17 7076360 7093945 ECH