Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0900 ATGGCTCCTCCAAGCTTAACAAAAAATGTAGCCATAGAAGTAATGAGTTTTGTGAACGGTGGTAACTTACCCTTATCAATTACCCTAGAAGGGTCAAATTTTCTTGCAAATGGTCACCCTTTTCTCACAGAAGTCCCACCAAACATAATAGCCACACCATCATCCGATGCCAAAAACACTGTCGGCGGTAGTTTCGTCGGCTTTGATGCCGACGAACCCAAAAGCCGACATGTGTTTTCTATCGGGAAGTTAAAAGGCATTAGGTTTATGAGTATATTCCGGTTTAAGGTGTGGTGGACCACACACTGGGTTGGAAGTAATGGACACGAAGTGGAACACGAAACTCAGATGTTAATGTTGGACAAAAACGACGTCGGTCGACCGTACGTTTTATTGTTGCCGATATTTGAAGGTTGTTTCCGTGCTTCGCTTCAACCTGGGTTGGATGATTACGTGGATGTTTGCTTGGAGAGTGGGTCAACACGTGTATGTGGGTCCAGGTTTAGGAGCTGTTTGTATATGCACGTTGGTGATGACCCATACCGTTTGATCAAAGAGGCTATGAAAGTTGTGAGAGTTCACTTGGGAACTTTCAAGCTTCTTGAAGAGAAAACACCACCAGGTATAATTGACAAATTTGGTTGGTGTACCTGGGATGCATTTTACTTGAAAGTGCATCCCAAAGGGGTATGGGAAGGTGTTAAGGGTCTAGTGGAGGGTGGATGCCCTCCCGGAATGGTCCTCATCGATGACGGATGGCAATCAATTTGTCACGACGAGGACTCAACAGACGAAGAGGGCATGACCCGAACCTTCGCCGGGGATCAAATGCCATGTAGGCTCATAAAATTTGAGGAAAATTACAAGTTTAAGGGCTACCATAGTCCCAATGGTTCAACAGGCATGGGTGCCTTTGTTAGGGACCTGAAGGAACAGTTTAGGAGTGTGGAACATGTGTATGTGTGGCATGCACTATGTGGGTATTGGGGTGGGATAAGACCTAAAGTTGAAGGGATGCCCGAGTCTAAGGTTGTTACTCCAAAATTGTCACAAGGGTTGAAAATGACGATGCAAGATTTGGCAGTGGATAAGATTGTGAATAACGGTGTGGGGTTAGTGCCACCGAATTTAGTACATGAGATGTATGAAGGATTGCACTCAGTTTTGGAATCGGTGGGAATTGATGGTGTTAAGGTTGATGTCATACATTTACTTGAGATGGTATCGGAGGAATATGGAGGGCGTGTTGAATTAGCAAAAGCTTATTACAAAACACTTACTGCTTCAGTGAAGAAGCATTTTAAAGGCAATGGAGTCATTGCTAGCATGGAACACTGTAATGACTTCTTTCTCTTGGGCACTGAAACCATATCACTTGCCCGTGTTGGTGATGATTTTTGGTGTGCTGATCCTTGTGGGGATCCAAATGGAACTTATTGGCTACAAGGGTGTCACATGGTGCATTGTGCCTACAACAGTTTGTGGATGGGGAATTTTATTCACCCAGATTGGGACATGTTCCAATCAACTCACCCTTGTGCTGAATTCCATGCAGCCTCAAGAGCCATATCTGGTGGACCAATTTATGTTAGTGATTCTGTTGGGGAAAACAATTTCAAGTTGCTCAAAAGTCTTGTTTTGCCTGATGGTTCTATTTTGCGATGTGAACATTATGCACTTCCTGCACGAGATTGCTTATTTGAAGATCCATTGCATGATGGAAAAACGATGCTCAAAATTTGGAATCTCAACAAATACACAGGAGTTTTAGGTTTGTTTAATTGCCAAGGAGGAGGGTGGTGCCCAGTGACTAGGCGAAACAAGAGTGCCTCTGAATTTTCACACACAGTAACAAGTTCAGCAAGTCCTAAAGATATTGAATGGAGTAATGGGAAACAACCAATGTGTATGAAAGGGGTGAATGTTTTTGCTGTATATTTTTACAAAGAAGAAAAACTGAAGCTCATAAAGTTATCTGAAAAGTTGGAAATTTCACTTGAGCCATTTAGTTTTGACCTATTAACAGTGTCACCAGTGATATTGTTACCAAAAAGTTTAATCCAATTTGCTCCAATTGGATTGGTAAATATGCTTAACTGTGGTGGTGCTATTCAATCAGTGGAGTTTGATGAGCATATAAATGTGGTCAAAATTGAGGTAAGGGGTTGTGGGGAAATGAAAGTGTTTGCATCAGAGAAACCAGTTAGTTGCAAAATAGATGGGGTTGCTGTGAAATTTGAATATGAGGATAAGATGGTTAGGGTCCAAGTTCCTTGGCCTAGTTCTTTAATATTGTCACTGGTTGAGTACTTGTTTTGA 2319 0.4226 MAPPSLTKNVAIEVMSFVNGGNLPLSITLEGSNFLANGHPFLTEVPPNIIATPSSDAKNTVGGSFVGFDADEPKSRHVFSIGKLKGIRFMSIFRFKVWWTTHWVGSNGHEVEHETQMLMLDKNDVGRPYVLLLPIFEGCFRASLQPGLDDYVDVCLESGSTRVCGSRFRSCLYMHVGDDPYRLIKEAMKVVRVHLGTFKLLEEKTPPGIIDKFGWCTWDAFYLKVHPKGVWEGVKGLVEGGCPPGMVLIDDGWQSICHDEDSTDEEGMTRTFAGDQMPCRLIKFEENYKFKGYHSPNGSTGMGAFVRDLKEQFRSVEHVYVWHALCGYWGGIRPKVEGMPESKVVTPKLSQGLKMTMQDLAVDKIVNNGVGLVPPNLVHEMYEGLHSVLESVGIDGVKVDVIHLLEMVSEEYGGRVELAKAYYKTLTASVKKHFKGNGVIASMEHCNDFFLLGTETISLARVGDDFWCADPCGDPNGTYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDSVGENNFKLLKSLVLPDGSILRCEHYALPARDCLFEDPLHDGKTMLKIWNLNKYTGVLGLFNCQGGGWCPVTRRNKSASEFSHTVTSSASPKDIEWSNGKQPMCMKGVNVFAVYFYKEEKLKLIKLSEKLEISLEPFSFDLLTVSPVILLPKSLIQFAPIGLVNMLNCGGAIQSVEFDEHINVVKIEVRGCGEMKVFASEKPVSCKIDGVAVKFEYEDKMVRVQVPWPSSLILSLVEYLF 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0900 772 Gene3D Aldolase class I 209 545 IPR013785 -
Lal17g0900 772 PANTHER - 21 772 IPR008811 -
Lal17g0900 772 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED 21 772 - -
Lal17g0900 772 SUPERFAMILY (Trans)glycosidases 208 555 IPR017853 -
Lal17g0900 772 Pfam Raffinose synthase or seed imbibition protein Sip1 30 755 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0900 Lal-Chr17 6956966 6964142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0900 1 772 Glycoside Hydrolase AT5G40390 64.177 0.0 1052
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0900 K06617 - gmx:100800308 1329.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0900 17 6956966 6964142 Lal17g0900 17 6956966 6964142 ECH