Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0883 ATGGCTTCTGCTAATGGACTAGCTACTGCACAAGGGAGACCGCCTCTCTTTTCTTTTGGTTTGATTTCTGATGTCCAGTATGCTGACATTCCTGACGGTCGATCGTTCCTAGGTGTTCCGCGATATTATAGGCATAGCATTCTCGTGCTGCAGAGTGCAGTTAAAGAATGGAATACTCATCAAAAGCATAAGTTTGTGGTGAACTTTGGAGACATTGTTGATGGGTTTTGCCCAAAAGATCAATCTCTTAATGCAATAAAGAAAGTCGTGGATGAATTTGAGATGTTCGAGGGACCTATCTATCATATGATTGGAAATCACTGTCTATACAATCTTCCTCGCAGTGAGTTACTTCCATTATTGAACATCCGAACTATCGATGACCGCGCTTACTACGACTTTTCACCAGTTCCTGAATATAGATTTGTAATTCTGGATGGTTATGACATCAGTGCAATTGGTTGGCCTAATGATCATCCAAAAACTCTGGAGGCTTTGAATTTTCTGAGCGAAAAGAATCCAAATGAAGATAAGAATAGTCCAAATGGTTTGGTGGGGCTTGAAAGAAGGTTTCTCATGTTCAATGGAGCTGTTGGAAAGGAACAGATGACATGGTTGGATGGTGTTCTTAGTGAGGCAACAAAATTGAAACAGAAGGTAGTGGTGTGTTGCCATCTACCTCTACATCCTGGTTCAGCATCGCCGGTGGCACTATTGTGGAATTTTGATGAGGTGATAGATTTGATACACAGATACAACTGTGTGAAGGTCTGTCTTGCAGGACATAATCACAAAGGTGGGTACTCCATTGATTCTCATGGAGTGCACCACAGAGTTCTTGAAGCTGCTCTGGAATGTCCTCCTGGCACAGATGCATTTGGATATGTTGATGTTTATGATGACAGAATATCACTTATTGGTACTGACAAAATGAAGAGTACAGACATGCATTTTAATCCTAAAGTCATTTTGTAA 975 0.4103 MASANGLATAQGRPPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSILVLQSAVKEWNTHQKHKFVVNFGDIVDGFCPKDQSLNAIKKVVDEFEMFEGPIYHMIGNHCLYNLPRSELLPLLNIRTIDDRAYYDFSPVPEYRFVILDGYDISAIGWPNDHPKTLEALNFLSEKNPNEDKNSPNGLVGLERRFLMFNGAVGKEQMTWLDGVLSEATKLKQKVVVCCHLPLHPGSASPVALLWNFDEVIDLIHRYNCVKVCLAGHNHKGGYSIDSHGVHHRVLEAALECPPGTDAFGYVDVYDDRISLIGTDKMKSTDMHFNPKVIL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0883 324 PANTHER - 1 321 - -
Lal17g0883 324 SUPERFAMILY Metallo-dependent phosphatases 15 314 IPR029052 -
Lal17g0883 324 CDD MPP_Nbla03831 17 305 IPR041869 -
Lal17g0883 324 Gene3D - 13 311 IPR029052 -
Lal17g0883 324 Pfam Calcineurin-like phosphoesterase 18 265 IPR004843 GO:0016787
Lal17g0883 324 PANTHER MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE 1 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0883 Lal-Chr17 6776251 6777225 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0883 K01517 - gmx:100815255 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0883 17 6776251 6777225 Lal17g0883 17 6776251 6777225 ECH
Lal14g1491 14 15861501 15865479 Lal17g0883 17 6776251 6777225 PCT
Lal7g0902 7 15526259 15527257 Lal17g0883 17 6776251 6777225 PCT