Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0882 ATGTTCTTCATCTTTTTCACCAAAACCATGATCACTATCTTTTTCTTCTTGCTTTGCCTTGGAGTTAGTGATGGTACCAGAGGTATATCCTATGAAGGAAGAAGAGAAGGGAAGTGGCAATTCCTTCTAAAAAGCACTGGTGTTGTTAGCATGCATATGGCATTAACCTATAAAAACACTGTCATAATGTTTGATCAAACCGGTGGTGGCCCATCTAGATATCTACTTAGAAAACGCTTTGGTGGAAGAAGGTGCAGTACTAGAAGCCGTAAGGATGTGGTGGATTCAACATGCTATGCTCATTCTGTAGAGTATGACATTAGGGATAATAGAGTGAGACCTTTGTGGCTTGACACTGATCCTTGGTGTTCTTCTGGTTCTTTTCTAAGCAATGGGACACTTCTTCAAACAGGTGGATATGGCAAAGGTGCCAAAAGGGTAAGATTTTATAGACCCTGTAGAAAGAATCAGCAATGTGATTGGAAGCAATCAAAGAATGACTTAACTGATGAAAGGTGGTATGCATCTACTCAAACACTATCAGATGATGATAGGGTAATTGTTGTAGGTGGAAGAACAGTTTTCACATATGAATTTGTACCAAAAATGAGTCATGGAGAAAAATCTTATAACCTTCCATTCTTGCACCAAACCAATGATAAGTATGCAAAAGGGAACAATCTTTATCCTTTCCTTCACCTTTCATCAGATGGGAACTTGTTCATTTTTGCAAACCGTGATTCCATTCTACTCAACCCTAGACAAAACAAAGTTATTAAGACTTTTCCTAGGATTCCAGGACATGGGTCAAGAAACTACCCAAGTTCTGGTTCATCTGTGTTGTTACCATTAGATCATAGATATAACTTCCAGAAGGTGGAAGTTATGGTGTGTGGAGGTGCAGCCACTGGAGCATTGAGAAGTGCTGGTAAGGGCAAGTTCATTCAAGGCTTAAGATCTTGTGGGAGAATGGTGATCACAGGCAACAAGCACAAGTGGGATATGGAGTACATGCCACAACCACGTCTTCTACATAACATGTTAATTCTCCCAACCAATGACATTCTCATTATCAATGGAGCTACACATGGTTGTGCAGGATATAACAATGCAAGAAACGCTTCTCTTGAACCTTATCTATATAACCCTAACAAAAGACTAGGAACAAGGTTCACAATCCTTAAATCCACCAAGATAGCCAGAATGTACCACTCATCAGCAACTCTTCTTCCTGATGGAAGGGTCCTTATTGGGGGTGGTAACCCTCATGGAAGGTACACCTTTCACAAAGTGGCATACCCTACAGAGCTAAGACTCCAAGCATTCATTCCATACTACATGAACAAGAGATATCATAACTTTAGGCCACGAAACTTGACTATAGAATCATATGGTGGTGGTAAAATCTATGGAATTGTGTATGAAAGAGAGTTTGTAGTAAGGTTTATGGTAGTGAAGTTTGGGAGCATTAATAATAATAAGATAGAGTTTAGTGCTTATGCACCACCTTTTACTACACATGGCCTTTCAATGAATCAGAGAATGTTGAAGCTGAGGTGCAAGAGAATGATGAAAATTAGTGGTGAGTGGGTTTCTGCAGTGTTAGAAGCTCCACCATCACCACATGTTGCACCAGCTGGTTATTATTTGATCACTGTTGTGAATGGTGGAATTCCAAGCATGTCTGAGTGGATTCAGTTTAGACATGCCTAG 1713 0.3999 MFFIFFTKTMITIFFFLLCLGVSDGTRGISYEGRREGKWQFLLKSTGVVSMHMALTYKNTVIMFDQTGGGPSRYLLRKRFGGRRCSTRSRKDVVDSTCYAHSVEYDIRDNRVRPLWLDTDPWCSSGSFLSNGTLLQTGGYGKGAKRVRFYRPCRKNQQCDWKQSKNDLTDERWYASTQTLSDDDRVIVVGGRTVFTYEFVPKMSHGEKSYNLPFLHQTNDKYAKGNNLYPFLHLSSDGNLFIFANRDSILLNPRQNKVIKTFPRIPGHGSRNYPSSGSSVLLPLDHRYNFQKVEVMVCGGAATGALRSAGKGKFIQGLRSCGRMVITGNKHKWDMEYMPQPRLLHNMLILPTNDILIINGATHGCAGYNNARNASLEPYLYNPNKRLGTRFTILKSTKIARMYHSSATLLPDGRVLIGGGNPHGRYTFHKVAYPTELRLQAFIPYYMNKRYHNFRPRNLTIESYGGGKIYGIVYEREFVVRFMVVKFGSINNNKIEFSAYAPPFTTHGLSMNQRMLKLRCKRMMKISGEWVSAVLEAPPSPHVAPAGYYLITVVNGGIPSMSEWIQFRHA 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0882 570 Pfam Galactose oxidase-like, Early set domain 472 566 IPR015202 -
Lal17g0882 570 Pfam Glyoxal oxidase N-terminus 51 300 IPR009880 -
Lal17g0882 570 SUPERFAMILY E set domains 493 567 IPR014756 -
Lal17g0882 570 PANTHER ALDEHYDE OXIDASE GLOX-LIKE 8 569 - -
Lal17g0882 570 Gene3D - 33 452 IPR037293 -
Lal17g0882 570 CDD E_set_GO_C 485 566 IPR015202 -
Lal17g0882 570 PANTHER SECRETED PROTEIN-RELATED 8 569 - -
Lal17g0882 570 SUPERFAMILY Galactose oxidase, central domain 103 446 IPR011043 -
Lal17g0882 570 Gene3D Immunoglobulins 467 570 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0882 Lal-Chr17 6763602 6766521 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0882 - - gmx:100814200 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0882 17 6763602 6766521 Lal17g0882 17 6763602 6766521 ECH