Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0881 ATGACCATAAATTGTGTCCCTAACATCATAGATGATTGCCTCATGGTGCGTGACAAGGCCATTTTGACTCATGTACCAAGTAACGTTATTCTTACACCCATCAACACTGAAGGTGCTTTTATTGGTGCATCTTCACAAACTTCTAGTTCTCGTCATACCTTTTCCCTTGGACTTCTCAAGGGGTTCAGGTTTACTAGTGTGTTCAGATTCAAAATCTGGTGGATGATACCAGCATACGGAGAATCGGGCCGCGAGGTGCAGACAGAGACTCAATTGCTTCTCTTGGAAGCAAGAGATGGAACTACCATTGATGATAAAATCAGTGAGTCAACAACTGAGGGAACTTTCTATATTCTCTTGTTGCCTCTCTTGGATGGACAGTTCAGGACTAGTTTGCAAGGGACAATCATGGATGAGCTTGAGTTCTGCGTTGAAAGCGGTGATCCTGATGTGGAAACTATGAAGGTAACAGAAGCAGTTTATGTAAATTCAGGGAACAACCCATTTAAGCTCATAACAAATTCCATGAAGATACTGGAGAAGCAAAAAGGAACTTTTAGACACATAGACAACAAGGAGTTGCCAGCACATGTAGACTGGTTCGGGTGGAACACCTGGGATGCATTTTATAGCAATGTCAGTGCACAAGGAATTGATGAAGGTCTTAAAAGCTTCTCAGAAGCAGGCTGCCTCCCGAAATGGGTTTGCATTGACGACGGATGGCAGAACACAACACGGACAACGCTAGAAAACAACGGTGAACCACCTGAGACAGCAAAATTCGCAGCCAGACTACAAAATCTAAAGGAAAATGCTAAGTTCAGCGATTCAGGAAGCGGATACGTTGATCTGCATGACTTTATAACAACCATCAAACAGAAATATGGGCTAAAATATGTGTATATGTGGCATGCATTAATCGGCTACTGGGGAGGACTGAATCCCTTATCTGATGAATTGAGTAAATATAACCCGAAATTTACATCCGTAGTTCAGTCTCCGGGAAACCTAAGCCATGTTGTATGCGTGATTGTTAAACTATTGGAAAAAGTTAGAGTGGGATTGATTGATCCCTTAAAAGTCGACGAGTTTTACAATGACCTCCATGCGTACCTTGCGCGCTGTGGGGTTGATGGAGTGAAGGTCGATGTTCAGTGCGTACTTGAAACTCTTGGTGCTGGTTATGGAGGGAGGGTTTCACTGACTAAATGTTTTCAAGAAGCTTTAGAAAATTCAGTTGTGAAGAACTTTGGTGGCAATAATCTTATTAGCTCAATGAGTTCTAACAATGAATACATATTCAGGTCAAAGAGAAGTGCTTCTGCTAGAGCTTCTGAGGATTTCATGCCGAACGAACCAACATTTCAGACCCTGCATGTTGCTGCTGTAGCATTCAATAGCCTTTTGCTAGGGGAGATAGTCATTCCTGATTGGGACATGTTTTATAGTACTCATCACACAGCAGAATTTCATGCAGCAGCAAGAGCACTGGGTGGTTGTCCAGTATATGTCAGTGACAAGCCTGGCAAGCATGACGTAAATATCATTAGAAAACTTGTACTGCCAGATGGGTCCATTCTGAGAGCTAAATATGCTGGTCGTCCAACTCGTGACTGTTTATTCGACGATCCAGTTATGGATGGAAAGAGTCTACTCAAAATTTGGAACCTGAACAAAGTATCTGGAATAGTTGGCATTTTCAATTGCCAAAGAGCTGGGAAATGGCCACCTACACCTGGTGAGACATTCCTATCAGACTCAGTTTCAGCATCTTTGACCCTTAGAGGTCATATTAGTGCAACAGATGTTGATTCACTTCAAGAAGTTGCTGATGATGATTGGAATGGAGATTCTGCAGTTTATGCATTAAATTCAGTTAACAGAAGTTCAACAATTCCAGGAAAACTATATAAACTTCCCAAAGGGACAACTATTGAAGTTTCCTTAGGAGTTCTAAAGTGTGAGGTTTTCACCATTTCTCCAATCAGGGTATTTGGTGAAAGACTAGAATTTGCTCCAATTGGTTTGCTTGATATGTTCAACTCAGGAGGAGCAAGTGAAGCTATTGTTGGGAGTTATATAAACCAAACTAAATGTGTTGTGAAAATCCAAGTACGAGGATGTGGTCGTTTTGGAGCATATTCCAACATAAAACCAAGTTATTGTTTAATAGACAAAGCAGAGGTGGGTTTTGCATACCATGCTAGCAATGGTCTAGTGACCTTTGAGATTCAAGGTGATTGCAAAGTGAGAGAAGTTGAATTTGTTTATCAAGATTTTCATGTTACAATATCTTAG 2298 0.4121 MTINCVPNIIDDCLMVRDKAILTHVPSNVILTPINTEGAFIGASSQTSSSRHTFSLGLLKGFRFTSVFRFKIWWMIPAYGESGREVQTETQLLLLEARDGTTIDDKISESTTEGTFYILLLPLLDGQFRTSLQGTIMDELEFCVESGDPDVETMKVTEAVYVNSGNNPFKLITNSMKILEKQKGTFRHIDNKELPAHVDWFGWNTWDAFYSNVSAQGIDEGLKSFSEAGCLPKWVCIDDGWQNTTRTTLENNGEPPETAKFAARLQNLKENAKFSDSGSGYVDLHDFITTIKQKYGLKYVYMWHALIGYWGGLNPLSDELSKYNPKFTSVVQSPGNLSHVVCVIVKLLEKVRVGLIDPLKVDEFYNDLHAYLARCGVDGVKVDVQCVLETLGAGYGGRVSLTKCFQEALENSVVKNFGGNNLISSMSSNNEYIFRSKRSASARASEDFMPNEPTFQTLHVAAVAFNSLLLGEIVIPDWDMFYSTHHTAEFHAAARALGGCPVYVSDKPGKHDVNIIRKLVLPDGSILRAKYAGRPTRDCLFDDPVMDGKSLLKIWNLNKVSGIVGIFNCQRAGKWPPTPGETFLSDSVSASLTLRGHISATDVDSLQEVADDDWNGDSAVYALNSVNRSSTIPGKLYKLPKGTTIEVSLGVLKCEVFTISPIRVFGERLEFAPIGLLDMFNSGGASEAIVGSYINQTKCVVKIQVRGCGRFGAYSNIKPSYCLIDKAEVGFAYHASNGLVTFEIQGDCKVREVEFVYQDFHVTIS 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0881 765 Gene3D Aldolase class I 197 519 IPR013785 -
Lal17g0881 765 Pfam Raffinose synthase or seed imbibition protein Sip1 9 744 IPR008811 -
Lal17g0881 765 PANTHER - 3 757 IPR008811 -
Lal17g0881 765 SUPERFAMILY (Trans)glycosidases 196 517 IPR017853 -
Lal17g0881 765 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 3 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0881 Lal-Chr17 6752180 6758358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0881 1 744 Glycoside Hydrolase AT5G20250 45.889 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0881 - - lang:109327884 1420.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0881 17 6752180 6758358 Lal17g0881 17 6752180 6758358 ECH