Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0873 ATGAAACGGTTTTTCAAAACAGTGGAGAAAGATTCTGATGCGTCATTGAAGAAACCAAAGCCAAATGAAGAAATTGAAGAGAAGAAAGAGCCTTTGAAATTCTTCACATGGAATGCTAATAGTTTTCTTCTTCGTGTCAAGAACAATTGGAACGAATTCACAAAATCCATCACCACTTTTGATCCTGACGTTATTGCCATACAGGAAGTGCGGATGCCTGCTGCTGGGTCTAAGGGCACACCTAAAAACCAGGGAGAATTGAAAGATGATACAAGCCCTTCCAGAGAAGAAAAGAAGATACTGATGCGTGCGCTTTCAAGTCCTCCTTTTGGTAACTACCTTGTTTGGTGGTCTCTTGCAGATTCAAAGTATGCAGGGACAGCACTACTTGTGAAAAAATGCTGCAAGCCAAAAAGTGTTGTTTTCAATCTTGATCAAATAGCTTCAAAGCATGAACCTGATGGCCGAGTAATCTTAGCTGAATTTGAAACACTTCGTTTATTGAATACATACGTACCAAACAATGGATGGAAAGAGGAAGTCAACTCATTTCAAAGGAGAAGAAAATGGGACAAAAGGATTCTGGATTTTGTTACCCAAAATTCAGACAAGCCTTTGATATGGTGTGGGGATCTGAATGTCAGTCATGAAGAGATTGATGTGAGTCATCCAGAGTTTTTTAGTTCTGCAAAACTCAATGGCTATGTTCCTCCTAATAAAGAGGATTGGGGGCAGCCTGGATTTACCTCCTCTGAAAGAAAGCGGGGAAAGCTGGTAGATGCCTACAGATTTCTGCACAAGGATAAAGACATGGAGCGGGGTTTCTCATGGTCTGGAAACCCAGTTGGAAAGTATCGTGGAAAACGAATGAGAATAGACTACTTTATAGTTGCAGAAGAGTTTAAAGAAAAGATTGTTGCATGTGAAATGCATGGACAAGGGATAGAGCTACAAGGTTTCTATGGAAGTGATCATTGTCCAGTGACATTGGAGCTTTCTCCAACTTCTAACTCTCAAAACGAGGATCCAGTATAA 1035 0.4048 MKRFFKTVEKDSDASLKKPKPNEEIEEKKEPLKFFTWNANSFLLRVKNNWNEFTKSITTFDPDVIAIQEVRMPAAGSKGTPKNQGELKDDTSPSREEKKILMRALSSPPFGNYLVWWSLADSKYAGTALLVKKCCKPKSVVFNLDQIASKHEPDGRVILAEFETLRLLNTYVPNNGWKEEVNSFQRRRKWDKRILDFVTQNSDKPLIWCGDLNVSHEEIDVSHPEFFSSAKLNGYVPPNKEDWGQPGFTSSERKRGKLVDAYRFLHKDKDMERGFSWSGNPVGKYRGKRMRIDYFIVAEEFKEKIVACEMHGQGIELQGFYGSDHCPVTLELSPTSNSQNEDPV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0873 344 MobiDBLite consensus disorder prediction 1 24 - -
Lal17g0873 344 SUPERFAMILY DNase I-like 32 332 IPR036691 -
Lal17g0873 344 Pfam Endonuclease/Exonuclease/phosphatase family 36 325 IPR005135 GO:0003824
Lal17g0873 344 PANTHER DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 23 335 - -
Lal17g0873 344 TIGRFAM xth: exodeoxyribonuclease III (xth) 32 332 IPR004808 GO:0004518|GO:0006281
Lal17g0873 344 CDD Ape1-like_AP-endo 32 332 - -
Lal17g0873 344 PANTHER AP ENDONUCLEASE 23 335 IPR004808 GO:0004518|GO:0006281
Lal17g0873 344 ProSiteProfiles AP endonucleases family 1 profile. 32 334 IPR004808 GO:0004518|GO:0006281
Lal17g0873 344 MobiDBLite consensus disorder prediction 73 95 - -
Lal17g0873 344 Gene3D Endonuclease/exonuclease/phosphatase 4 334 IPR036691 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0873 - - gmx:100817167 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0873 17 6702566 6709993 Lal17g0873 17 6702566 6709993 ECH