Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0858 ATGGCCACACCTACTTTGGAAGATGTTCCCACTCTCACTCTCATGTCTGAACTTCTCCGTCGTTTCAACTGTTCTTCTAAACCCGATAAGCGTCTCATTCTCATTGGTCCACCTGGGTCAGGAAAGGGCACTCAGTCACCCATCATAAAGGATGAGTACTGCTTGTGCCACTTAGCTACCGGTGATATGTTAAGAGCCGCTGTTGCAGCTAAAACCCCTCTTGGCATTAAGGCTAAAGAAGCTATGGATAAGGGTGAACTTGTTTCTGATGACTTAGTTGTTGGTATTATAGATGAAGCAATGAAAAAACCATCATGTCAGAAAGGTTTCATTCTAGATGGTTTTCCAAGAACTGTGGTCCAAGCACAGAAGCTTGATGAGATGCTGGAAAAACAAGGATCTAAAGTTGATAAGGTGCTCAATTTTGCTATCGATGATGCTATCCTCGAGGAGCGAATTACTGGTCGCTGGATACACCCATCCAGTGGCAGAACCTACCACACAAAATTTGCTCCTCCCAAGGTTCCAGGTGCTGATGATGTTACTGGCGAACCTCTTATTCAGCGCAAGGATGACACTGCAGCTGTTCTCAAGTCAAGACTGGAGGCATTCCACAAGCAAACTGAACCGGTTATTGATTACTATTCAAAGAAGAACATTGTTGCTAATCTTCATGCTGAGAAGCCTCCCAAAGAAGTAACATCTGAAGTGGAGAAGGTGCTGTCTTCATAA 732 0.4426 MATPTLEDVPTLTLMSELLRRFNCSSKPDKRLILIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLEKQGSKVDKVLNFAIDDAILEERITGRWIHPSSGRTYHTKFAPPKVPGADDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKNIVANLHAEKPPKEVTSEVEKVLSS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0858 243 PRINTS Adenylate kinase signature 33 46 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal17g0858 243 PRINTS Adenylate kinase signature 61 75 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal17g0858 243 PRINTS Adenylate kinase signature 110 126 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal17g0858 243 PRINTS Adenylate kinase signature 189 204 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal17g0858 243 PRINTS Adenylate kinase signature 206 220 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal17g0858 243 CDD ADK 31 233 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal17g0858 243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 241 IPR027417 -
Lal17g0858 243 PANTHER ADENYLATE KINASE 4-LIKE 9 243 - -
Lal17g0858 243 Hamap Adenylate kinase [adk]. 30 242 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal17g0858 243 Pfam Adenylate kinase 34 219 - -
Lal17g0858 243 Gene3D - 3 242 IPR027417 -
Lal17g0858 243 ProSitePatterns Adenylate kinase signature. 110 121 IPR033690 -
Lal17g0858 243 PANTHER NUCLEOTIDE KINASE 9 243 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal17g0858 243 Pfam Adenylate kinase, active site lid 156 191 IPR007862 GO:0004017
Lal17g0858 243 TIGRFAM adk: adenylate kinase 31 241 IPR006259 GO:0004017|GO:0005524|GO:0016776
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0858 Lal-Chr17 6519520 6523108 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0858 K00939 - jre:108983966 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0858 17 6519520 6523108 Lal17g0858 17 6519520 6523108 ECH