Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0852 ATGGCACCACACGATCTCCGCCGTTCATTCAAGCGACCCGCGATCTCCGATCAAGAGAGACGCCGTCAACAATCCCTACTCCGCCAATCACAGAATCGCCGCGACGCTCAGCACCACGCTCGGTTCTTAGCCTCCACCGCTTTCTCTCTCCCATCCCAAACCCCCGAACTCGAACCCTCATTCTCCCAACCCGAACACATTCCCGATTCTCAACCCGAACCTTCGTTCAAAGACCTCGACGTGGTTGAAGCATCGAAGCTGAAAGGCGCAGAAGCTCGCAAATGGTTCTCGAAACAGTTAATGCTTCCTGAATGGATGATTGATATTCCCGATAAACTCACCATAGATTGGTTCGTGTTTGCTAGGCCTTCTGGAAAACGTTGTTTTGTGATTTCATGCAACGGCACAACAATAAGTCGTTTAAAGAACGGTTCTATATTACACCGTTTTCCTTCTGCTCTTCCAAACGGTGCAAGAAGAAAAGATGCTTCTGGTTCTTCTCAATCATACTCTATATTAGACTGCATTTTTCACGAGGTGGATCAGACTTACTATGTTATTGACATGATTTGCTGGAAGGGTTACTCCCTGTGTGACTGCACTTCTGAGTTCAGGTTCTTCTGGTTGAACTCCAAGCTTGCAGAGACTGGTGCTTGTGACCCTCCCTCATATTATCACAAGTACAGGTTCAGTTTGGTTCCAGTGTATTCTTGCGACCGGGATGGTCTATCTGCGGCTTATACTGCTGCGTTGCCTTATGTCAAAGATGGTCTCCTGTTTTATAACAAGCATGCACACTACCAGACAGGAATTACACCACTAGCATTAGTTTGGAAGGATGGGAACTGTAGTCAATATGTTATGGACACAGATAGTAAAGGACAGGTTCCGAGCCAACAACAGGTGGTTTTGGAGCTACAAGAAGATGGAAAAGTGACTACCTGCGATGATCCTCCAGTGGTATTTGGGTGTTTAGATGGAAGCTATACACAGCAGTTAGGGTTGAATTCAGGATGTCTTATCCGGTTTGCAATTGGAGAGGGAGGGTTGGTTTTAGTGGATGGGAAGCTTGAGAAAGCTGATCTAAATTATCTTGGCCAGGCTAATCGAGCTCGTGCCTCTGCTGATATTTTCTCTAAGGTTATGTTCCAATATAGTGTTCGACACTCTCCCCTGAGAATCGACGATCTGTTAGGATCTATCATCTCAACAGTTGATCAAGAAAGCAAAGCTTGTGATATTGAGATGGATGGTTGA 1257 0.459 MAPHDLRRSFKRPAISDQERRRQQSLLRQSQNRRDAQHHARFLASTAFSLPSQTPELEPSFSQPEHIPDSQPEPSFKDLDVVEASKLKGAEARKWFSKQLMLPEWMIDIPDKLTIDWFVFARPSGKRCFVISCNGTTISRLKNGSILHRFPSALPNGARRKDASGSSQSYSILDCIFHEVDQTYYVIDMICWKGYSLCDCTSEFRFFWLNSKLAETGACDPPSYYHKYRFSLVPVYSCDRDGLSAAYTAALPYVKDGLLFYNKHAHYQTGITPLALVWKDGNCSQYVMDTDSKGQVPSQQQVVLELQEDGKVTTCDDPPVVFGCLDGSYTQQLGLNSGCLIRFAIGEGGLVLVDGKLEKADLNYLGQANRARASADIFSKVMFQYSVRHSPLRIDDLLGSIISTVDQESKACDIEMDG 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0852 418 MobiDBLite consensus disorder prediction 52 69 - -
Lal17g0852 418 Gene3D DNA ligase/mRNA capping enzyme 1 305 - -
Lal17g0852 418 MobiDBLite consensus disorder prediction 52 76 - -
Lal17g0852 418 MobiDBLite consensus disorder prediction 1 38 - -
Lal17g0852 418 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 417 IPR017336 GO:0005634|GO:0005737|GO:0061015
Lal17g0852 418 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 95 279 - -
Lal17g0852 418 CDD Snurportin-1_C 95 280 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0852 K13151 - gmx:100801927 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0852 17 6442034 6452708 Lal17g0852 17 6442034 6452708 ECH