Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0850 ATGGAAGGAAGTGTTGGTAGTAATTGTTTGAAGCAGAAGATAATTTTGATGTTATATTTGTGGTTCACAAATTTAAGCATTGTTTTTGGGAATAATCATCATCATATAGTTGGATTTGGAGAACAACCACTGTCCAAGATTTCCATTCACAAAACTATTCTTGCACTTCACAGTTCCGCTTCCATTACAGTAACCCCTTTTTTTCTGGGCATTAAGGGAGAGGATACAGATTGGGTGACTGTTCAACTGGAATCCCCAGAACCATCTATAGATGACTGGGTGGGAGTTTTTTCTCCTGCAAATTTTGATTCAGAATCATGTCCAGCTACTCAGAATGATGTTGGCTATGTAGAGACTCCATATGTATGCACAGCCCCAATAAAGTACATGTATGCGAACCACTCGAGTTCAAACTATATAAAGACAGGGAAAGCTACTTTGAAGTTCCAATTGATCAATCAACGCGCAGATTTCTCCTTTGCGCTATTTTCAGGTGGATTATCAAATCCTAATCTAGTGGCAGTTTCCAATAAAATATCATTTGTGAATCCTAAAGCACCTGTGTATCCGCGCCTTGCTCTAGGAAAGTCTTGGGATGAAATGACAGTTACCTGGACAAGTGGATATGACATAGATGAAGCTATACCCTTTGTTCAATGGGGTCCAAGTGGAGAAAGGAAGACACGATCTCCTGCTGGAACATTGACATTTAGTCGGAACAGCATGTGTGGTGAACCTGCACGAACTGTTGGCTGGCGTGATCCTGGTTTTATACACACAAGTTTCCTTAAAGAACTATGGCCAAATCAGAGGTATACCTATAGGCTGGGACATATTTTGTCTAATGGTTCTTACGTCTGGAGTAAGAAGTATTCATTCAAGGCAGCACCATATCCTGGACAAAACTCATTGCAGCGTGTTATCATATTTGGTGACATGGGAAAGGCTGAGCGTGATGGTTCAAATGAGTATGCTAATTACCAACCTGGTTCACTTAACACTACTGACCAGCTCATCAATGACTTAGACAATTATGACATTGTTTTTCACATTGGAGATCTACCTTATGCAAATGGATACATATCACAATGGGATCAATTCACAGCTCAAGTGCAAGAAATTTCCTCAAGAGTACCATATATGATTGCAAGTGGAAATCATGAACGTGATTGGCCAAACACAGGATCCTTTTATAATACTCCTGATTCAGGTGGAGAATGTGGAGTTCTAGCAGAAACCATGTATAAGGCAGACTATGGCATGTTTCGTTTCTGCATAGCAGACAGTGAACATGATTGGAGACAGGGATCAGAACAGTACAAATTCATCGAGCAATGTCTCGCAACAGTAGATAGAAAGCAACAACCATGGCTGATCTTTTCAGCACATCGTCCCCTTGCATATTCCTCCAATGCTTGGTATGGCATGGAGGGATCATTTGAAGAGCCTGAGGGAAGAGAGCATTTGCAGCATCTTTGGCAGAAGTACAAAGTAGACATCGCGTTTTATGGTCATGTCCATAACTATGAAAGAGTATGCCCCATTTATCAGAATCAATGTGTGAATTCAGAGAAAACTCATTACTCAGGCACTGTGAATGGAACAATCCATATTGTTGTTGGTGGAGGTGGAAGTCACTTGTCAGACTACACCCCATCACCCCCGATTTGGAGTCTTTTCAGGGACCGTGACTTTGGGTTTGGAAAATTGACAGCATTCAATCACTCATATCTCTTGTTTGAGTATAAGAAAAGTAGTGATGGAAATGTCTATGATTTTTTCACCATTTCAAGGGACTACAGAGATGTATTGGCCTGTGTGCATGATGGTTGTGAGAAAACCACTTTAGCAACCTAA 1857 0.4082 MEGSVGSNCLKQKIILMLYLWFTNLSIVFGNNHHHIVGFGEQPLSKISIHKTILALHSSASITVTPFFLGIKGEDTDWVTVQLESPEPSIDDWVGVFSPANFDSESCPATQNDVGYVETPYVCTAPIKYMYANHSSSNYIKTGKATLKFQLINQRADFSFALFSGGLSNPNLVAVSNKISFVNPKAPVYPRLALGKSWDEMTVTWTSGYDIDEAIPFVQWGPSGERKTRSPAGTLTFSRNSMCGEPARTVGWRDPGFIHTSFLKELWPNQRYTYRLGHILSNGSYVWSKKYSFKAAPYPGQNSLQRVIIFGDMGKAERDGSNEYANYQPGSLNTTDQLINDLDNYDIVFHIGDLPYANGYISQWDQFTAQVQEISSRVPYMIASGNHERDWPNTGSFYNTPDSGGECGVLAETMYKADYGMFRFCIADSEHDWRQGSEQYKFIEQCLATVDRKQQPWLIFSAHRPLAYSSNAWYGMEGSFEEPEGREHLQHLWQKYKVDIAFYGHVHNYERVCPIYQNQCVNSEKTHYSGTVNGTIHIVVGGGGSHLSDYTPSPPIWSLFRDRDFGFGKLTAFNHSYLLFEYKKSSDGNVYDFFTISRDYRDVLACVHDGCEKTTLAT 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0850 618 CDD MPP_PAPs 305 598 IPR041792 -
Lal17g0850 618 Pfam Fn3-like domain from Purple Acid Phosphatase 62 183 IPR040974 -
Lal17g0850 618 Pfam Iron/zinc purple acid phosphatase-like protein C 534 592 IPR025733 -
Lal17g0850 618 Gene3D - 300 602 IPR029052 -
Lal17g0850 618 PANTHER PURPLE ACID PHOSPHATASE-RELATED 35 617 - -
Lal17g0850 618 SUPERFAMILY Metallo-dependent phosphatases 305 600 IPR029052 -
Lal17g0850 618 Pfam Calcineurin-like phosphoesterase 306 509 IPR004843 GO:0016787
Lal17g0850 618 Gene3D - 186 298 - -
Lal17g0850 618 PANTHER PURPLE ACID PHOSPHATASE 35 617 - -
Lal17g0850 618 Pfam Purple acid Phosphatase, N-terminal domain 191 294 IPR015914 GO:0003993|GO:0046872
Lal17g0850 618 SUPERFAMILY Purple acid phosphatase, N-terminal domain 165 297 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0850 Lal-Chr17 6427308 6434106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0850 58 592 Miscellaneous Gene Families AT1G13900 30.100 3.09e-59 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0850 K22390 - gmx:100775672 1095.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0850 17 6427308 6434106 Lal17g0850 17 6427308 6434106 ECH