Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0845 ATGGAGGTAGAGATCAAAGAGTTACTTGCTGATCTTCAATCTCTCAATCAATCTCTTCTCGATCCATCTCTCCATGCCTCACTCCATAAGATTCAATCGCGTGTTGAACATCTTGCTAATCTAGCTAAGGCTGAACCTGTTAGACGCTCTAAAGTTCAGGATATGAGTACTGAGGTTGTTGATAGCAATCCGTATAGTCGGCTTATGGCGCTTCAGAGAATGGGAATTGTGGAGAATTATGAGCGGATACGGGATTTCTCCATTGCCATCGTTGGAGTTGGGGGTGTAGGAAGTGTTGCTGCTGAGATGTTAACTAGATGTGGTATAGGTCGACTTTTGTTGTATGATTATGACAAAGTAGAGCTTGCAAACATGAATAGGCTCTTCTTTCGTCCAGATCAGGTTGGTATGACAAAGACGGATGCAGCAGTAGAAACTCTTTCTGATATAAACCCTGATGTTGTGCTTGAGAGCTACACACTGAATATCACAACAGTTGAAGGTTTTGAAACCTTTATGTCATCTCTGAAAAATAAATCATTTAGCCCCAGTAAAGAAGGCAGTGGCGTAGATCTTGTCTTAAGCTGTGTAGATAATTATGAAGCAAGAATGGCTGTTAACCAGGCTTGTAATGAATTGAGCCAGACATGGTTGGAGTCAGGTGTTTCTGAGGATGCTGTTTCTGGTCATATCCAGTTACTTATTCCTGGTGAAACTGCCTGTTTTGCATGTGCACCTCCCCTGGTTGTAGCGTCTGGGGTAGATGAACGTACGCTCAAGCGCGAAGGGGTCTGTGCTGCATCTTTACCAACCACCATGGGGGTTATTGCTGGGCTTCTAGTCCAAAACACACTCAAGTTCTTGTTAGGTTTTGGTCAAGTCTCTCCATATTTGGGATATAACTCTCTTAAGGATTTTTTCCCAACCATGCAAATGAAGCCAAACCCTCAATGTTCAAATGTAGCTTGCTTAACAAGACAAGAAGAGTATGCACTTGCAAAGCCAGCAAGAGATGCTGCAGCAAAAGCGAAATTGGATGCTGAACCACAGTCAACTGAGGAAGGCCCACTTCACGATGATAATGAATGGAATATAAGTATTGTTGATGATTGTGAGCCAGAAGGTCCTGATACCAGAAGTTCAGATGTTCTGCCTGAAGGTCTCACTCATGAACTTCCTAGTGCGGATGAGTTTCAGAAACTTCCTACAGAAGCTCCGGTCATCGATAATGATGACCTTGAGGATCTCAGGAAGCAACTTGAAGCCATTAATTCTGCTTAA 1281 0.4309 MEVEIKELLADLQSLNQSLLDPSLHASLHKIQSRVEHLANLAKAEPVRRSKVQDMSTEVVDSNPYSRLMALQRMGIVENYERIRDFSIAIVGVGGVGSVAAEMLTRCGIGRLLLYDYDKVELANMNRLFFRPDQVGMTKTDAAVETLSDINPDVVLESYTLNITTVEGFETFMSSLKNKSFSPSKEGSGVDLVLSCVDNYEARMAVNQACNELSQTWLESGVSEDAVSGHIQLLIPGETACFACAPPLVVASGVDERTLKREGVCAASLPTTMGVIAGLLVQNTLKFLLGFGQVSPYLGYNSLKDFFPTMQMKPNPQCSNVACLTRQEEYALAKPARDAAAKAKLDAEPQSTEEGPLHDDNEWNISIVDDCEPEGPDTRSSDVLPEGLTHELPSADEFQKLPTEAPVIDNDDLEDLRKQLEAINSA 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0845 426 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 88 116 IPR029752 -
Lal17g0845 426 PANTHER BNAANNG16230D PROTEIN 1 426 - -
Lal17g0845 426 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 1 426 IPR045886 -
Lal17g0845 426 MobiDBLite consensus disorder prediction 341 399 - -
Lal17g0845 426 Gene3D - 82 343 - -
Lal17g0845 426 CDD ThiF_MoeB_HesA_family 64 312 - -
Lal17g0845 426 Pfam ThiF family 65 319 IPR000594 -
Lal17g0845 426 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 60 323 IPR035985 GO:0008641
Lal17g0845 426 MobiDBLite consensus disorder prediction 341 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0845 Lal-Chr17 6356398 6362216 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0845 60 175 EF-hand Containing Proteins AT2G30110 31.933 9.86e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0845 K12164 - gmx:100816132 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0845 17 6356398 6362216 Lal17g0845 17 6356398 6362216 ECH