Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0844 ATGAAGAATAAGAAAAGCGAATTCGAATTCTGCAAAGTGTGTAATTTAAACCACAACCAAGGTCTTCATCATAAGTACTTCCCTAATCACAGGAAATCACTTTCTACATTCCTCACTCGATTCCGTAACAAACTCTCCGATGTTTGTTTCTTCCTCAACAATCCTTCCCCTCGCAGCCCCGAACTCGCTTCTCGCAATCGCTTCTGGTGTTTTTTTTGTGACAAAGATATAGATGAACTTGATAGTTCCTTTGCCTGTGCTAACGCGATTTGTCACCTTGCGAGCGTTGAACACGTGAAGAATTTGAAGCATTTCTTCTGGAAATATGGTGGTGTTGTGGATCAGTTGAATGCCTTTACTGTTTCTGATGATGATTTAGCTAAGTGGGAAAAGAGGTGTACAGCCTTGAAAAATGAAGCTATGTCGTTGAGTGAAGGATGTCACAGTGGAACTGTATTTGGACCTTCAACTGATATCCATAATCAAAACAAAATTGGAAATATAGATAGTTTTGATAATATTTATTCCCATTCTGTGAAATCACACCCTTCAAATGGTGTTTTGCCTTTACAATGCTATACAAATGAGTATCAGGTATCCTATTCAGGTCTTTCTGGAGTTGGCAATGCTGATCTGTTAGATAACAATATTGCTACGTCTTTACCTTTGGAAACATTATGCTCTGGTGCAAACTCTTCTGTGCAGAATTTTGCAGTTGAAAGGGGAAGTCATTCTCTCCCTTGTAATGGTATGCAATGGTCGAGTGTTGGTAACTCCAGCAATAAAGGGGTTTGTAACAATGGTGGAATGGTAAGCGGGGAGAGCAGTCATCAGGGTCTGCAGATGCTCACCCGGATCTCCTCTATGCCTACTAAAATTGCTGGTGGAAGTGGAAATGTTCATTCTGGAGCACCTCCACCGTGGTTGGAAGCAGCTGAGGGAGTTCAGATACACTCCCAAACTGTTTTAGGAAACCTTTTTTCCCATTCTAAAAAGTCAGGGAAGTCCAAAAAGTTGAATCCAAAACGGGTGGGAGCAGCTTGGGCAGAAAGGAGAAAGATTGAATTGGAAATGGAGAAGAGGGGAGAGACTGTGCAGAATGAGTGTGATGCCAATTGGCTTCCCAATTTTGGTAGAGTCTGGCAATCTGGTAGCAGAAAAGAATCCAGAAAAGAATTTGAGAGGGAGAAACAACAATTATCAAACATTGAAACTCAACCTGAGATGTCAGTCAAGATACAACCTTATGTTAGCAAAAGAATGCGGATGGATAATGGAGGGAATGATGCTGGTCAGTGA 1299 0.4134 MKNKKSEFEFCKVCNLNHNQGLHHKYFPNHRKSLSTFLTRFRNKLSDVCFFLNNPSPRSPELASRNRFWCFFCDKDIDELDSSFACANAICHLASVEHVKNLKHFFWKYGGVVDQLNAFTVSDDDLAKWEKRCTALKNEAMSLSEGCHSGTVFGPSTDIHNQNKIGNIDSFDNIYSHSVKSHPSNGVLPLQCYTNEYQVSYSGLSGVGNADLLDNNIATSLPLETLCSGANSSVQNFAVERGSHSLPCNGMQWSSVGNSSNKGVCNNGGMVSGESSHQGLQMLTRISSMPTKIAGGSGNVHSGAPPPWLEAAEGVQIHSQTVLGNLFSHSKKSGKSKKLNPKRVGAAWAERRKIELEMEKRGETVQNECDANWLPNFGRVWQSGSRKESRKEFEREKQQLSNIETQPEMSVKIQPYVSKRMRMDNGGNDAGQ 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0844 432 PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 84 1 425 IPR028015 -
Lal17g0844 432 Pfam Coiled coil protein 84 10 399 IPR028015 -
Lal17g0844 432 Coils Coil 386 406 - -
Lal17g0844 432 MobiDBLite consensus disorder prediction 384 401 - -
Lal17g0844 432 MobiDBLite consensus disorder prediction 383 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0844 Lal-Chr17 6351059 6355319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0844 - - mtr:MTR_3g099220 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0844 17 6351059 6355319 Lal17g0844 17 6351059 6355319 ECH
Lal17g0844 17 6351059 6355319 Lal4g0720 4 5895047 5899602 LSH