Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0840 ATGGGAATTTGTAATCTCAAATCACCACACCATTTTCAATCAATTCTCTTGCTTCTTTTAACTGTGTCAAGTTTGTTTCTTTATCCAAAAAGTTATGCTTTTGCAGCAGCACAACAACAACAACAAAAACATCAACCAATCAAAACCATTGTGGTTTTGGTTATGGAGAACCGTTCCTTTGATCACATGCTTGGGTGGATGAAAAAAGCTATTAACCCTTTAATCAATGGTGTCACAGGAGATGAATGCAACCCAGTTTCAACTAAAAATCCAAGGAAAGATGCAATTTGCTTCAGTGATGATGCTGAGTTTGTGGATCCGGATCCAGGGCATTCATTTGAGGATGTGTTGCAACAGGTATTTGGCTCTAGTTCTAGTTCTAGTTCCATTCCTTCAATGAATGGTTTTGTGGAACAAGCATTGTCCTTGTCTCAGAACCTCTCTGAGACAGTGATGAAAGGGTTTAGACCTGAATCTGTGCCTGTTTATGCTGCTTTGGTTAGGGAATTTGCTGTTTTTGATAGGTGGTTTTCTTCAATTCCTGGTCCAACACAACCTAATAGGCTTTTTGTCTACTCTGCAACTTCTCATGGTTCAACAAGTCATGTTAAGAGGCAATTAGCTACAGGGTATCCTCAAAAAACCATTTTTGAGTCTCTCCATGGGAATGGTTTGGACTTTGGGATTTATTTTCAGAACATACCAACAACCTTGTTCTATAGGAATCTAAGGAAATTGAAATACATTTCTAAGTTCCATCAGTATGATTTTAAGTTCAAGAAAGATGCTAGAGATGGGAAGCTACCAAACTTGACTGTGATTGAGCCTAGGTACTTTGATTTGAAGGGCTTTCCTGCAAATGATGACCACCCATCTCATGATGTTGCAAATGGTCAAATGTTGGTTAAGGAGGTTTATGAGGCTCTTAGAGCAAGCCCTCAATGGAATGAAACTCTTCTGGTCATTACCTATGATGAACATGGTGGTTTTTATGATCATGTAGAGACTCCCTTTGTCAACATTCCTAGTCCAGATGGGAACACTGGACCTGCTCCTTATTTCTTCAAGTTTGATAGGTTAGGTGTTCGGGTGCCGACTATTATGATTTCTCCTTGGATCAAGAAAGGGACCGTGATAAGTGGCGCCAAAGGACCTGCTGAAAACTCGGAATTCGAGCACTCTTCCATTCCCGCCACCATAAAGAAGATGTTCAACCTCTCCTCCAATTTTTTGACTCACAGAGATGCATGGGCCGGAACATTTGAGGATATTGTTGGAGAGTTAAGTTCACCTAGAACAGATTGTCCAGCGACTTTGCCGGACGTGACACCTTTGAGGAGTACTGAGGCAAAAGAAGATGCAGGACTATCTCAGTTTCAGAGTGAGGTAGTTCAACTGGCTGCTGTTCTGAATGGAGATCATTTCTTGAGCAGTTTCCCGGACGAAATAAGCAAGAAGATGAGTGTGAAGGAAGCTCACGAATATGCACGCGAAGCTGTTTCGAGATTCATTAGAGCTAGCAAAGAAGCCATCAAGTTAGGGGCAGATGAGTCTGCTATTGTGGATATGAGGTCATCCCTCACTACTAGAACTTCAACTCACAATTAA 1608 0.4129 MGICNLKSPHHFQSILLLLLTVSSLFLYPKSYAFAAAQQQQQKHQPIKTIVVLVMENRSFDHMLGWMKKAINPLINGVTGDECNPVSTKNPRKDAICFSDDAEFVDPDPGHSFEDVLQQVFGSSSSSSSIPSMNGFVEQALSLSQNLSETVMKGFRPESVPVYAALVREFAVFDRWFSSIPGPTQPNRLFVYSATSHGSTSHVKRQLATGYPQKTIFESLHGNGLDFGIYFQNIPTTLFYRNLRKLKYISKFHQYDFKFKKDARDGKLPNLTVIEPRYFDLKGFPANDDHPSHDVANGQMLVKEVYEALRASPQWNETLLVITYDEHGGFYDHVETPFVNIPSPDGNTGPAPYFFKFDRLGVRVPTIMISPWIKKGTVISGAKGPAENSEFEHSSIPATIKKMFNLSSNFLTHRDAWAGTFEDIVGELSSPRTDCPATLPDVTPLRSTEAKEDAGLSQFQSEVVQLAAVLNGDHFLSSFPDEISKKMSVKEAHEYAREAVSRFIRASKEAIKLGADESAIVDMRSSLTTRTSTHN 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0840 535 Pfam Phosphoesterase family 47 406 IPR007312 GO:0016788
Lal17g0840 535 Gene3D Alkaline Phosphatase, subunit A 36 211 IPR017850 -
Lal17g0840 535 Gene3D Alkaline Phosphatase, subunit A 279 454 IPR017850 -
Lal17g0840 535 SUPERFAMILY Alkaline phosphatase-like 172 405 IPR017850 -
Lal17g0840 535 PANTHER - 23 535 - -
Lal17g0840 535 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 23 535 IPR007312 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0840 Lal-Chr17 6303976 6306599 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0840 36 530 Acyl Lipid Metabolism Gene Families AT3G48610 80.606 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0840 K01114 - gmx:100786332 922.924