Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0838 ATGGAGGATCCACCACTACCATCATCATCACCATCATCGAGCACGAAAGCGAGAGGTTCAAACGATTCGAATACGAGTATTGGAGGTTTGAATTTGCTGAACGATGATCTTGTTCAAAACATTCTTTCTAGGCTTCATGCTCCATCATTCGCTTCAGCAGCTTGCGTCACCAAATCATGGAACCTTATCTGCAATCGCATTCTCTTTCGTCCTAAGCTCTCAACTTCTCTCTCTCTCAATCCTTTGCTACACGATGCTGTGAACGAGGTTGTTAACAAAGTTTTGTCTGAGCCTATTCGTCCTCATTTTGCTATTGTCAATGTTGGAAGTGGTTTTGAATTATCCAAGACTCTACAACTTATTAGAGGGAGATTGGGATTCAATATTCCCGTTATTGTTTCTGTGGCAAATGGTATTATTGGAAGTGATGCTGTAACTGATGAATTCAAAGAGGTCAAGTGGGGTGTCCTTTTTAGTGGCTTCTCCGGGGATGGATATACCAGAAATATAAACGAAGGCATAGTTTTGACTGTTGGTTACTTGCCAGGATTAAAAGTTGAAGCCATACCGTTAGTGCGGCCATCAAAGACATCTCAAGCACGGTGTATTGATGATTTTGTAATGGATATCAATGAGTATTCAGCCTCTGTCTCCATGCGTCCATTTCCCGATGCAGTTATATTAATTGGAGAAGCAAGCAGTGACATGAAACCAGTTATGGAGAAGTTGGATTATGCCATGCCTAAGGACACAGTCATTGTGGGTGATGAGAGAAGCTGCTTTATATACAGAAGTGGAAATGATTCTAGAAATGCTTGTGGTAGAAGGGGGAACATAGAAGCTGTTGCCCTTGTATTTGCCGAGGACAGAGACAGAGTTTCTGGAAAGATCAAATTCCATGTTGCACTGTCAAATGGTGTTTCAGCTGTGGGTGCCAAATACAAGACAGCTTCAGTTAGAACAAGCAGCACCGATAGTTCAACTTGGCTAACTGCCAGGAGGGAAGGGCAACTGGAACATCTTGATGGTCAGACTATTCTACATGATATTCATGAATTGCTGGAAAATCATATTGAGTCTCCTGATTTGTACATCGGGGTTGTTAAACATAGAAAATTCTCCATTGGAGTAGGGAAGCCAATGCCAAGAACTTGTATTGCATATCATGGAGTCGTGGGAGGTGATGAAGAGTATCTGTATGTGGATGGAATTGGCATCAAGACAGGAGATAACTTTCAATTCTACCGTTCAGATCCTAATAGTGCATCAGCTTCATTGGCCAAGGTCCATGATTCACTCAAGAATATTAAGCTGGAAGGAAATTCCAAGACTAATGGAGACAACATTGTCGATGTTTTCGGGGGTCTTATTTTTGCTTGTTATGGCCGTGGTGAATCATTCTTCGGACATGTGAATGTTGATAGCTCCCCTTTCTTGGAGAATTTTCCTGGAGTGCCTTTGGCTGGAACATTTTGTGGTGGAGAAATGGTGCGTCCTTGTACCACTTTCCTCAGTGAATCTCAAGAAGGTAGCCCCATTAGTTGTTGTCTTCATGTTTACAGCACTGTCTATTTAGTAATGTCATACACTCCACTGTGA 1599 0.4209 MEDPPLPSSSPSSSTKARGSNDSNTSIGGLNLLNDDLVQNILSRLHAPSFASAACVTKSWNLICNRILFRPKLSTSLSLNPLLHDAVNEVVNKVLSEPIRPHFAIVNVGSGFELSKTLQLIRGRLGFNIPVIVSVANGIIGSDAVTDEFKEVKWGVLFSGFSGDGYTRNINEGIVLTVGYLPGLKVEAIPLVRPSKTSQARCIDDFVMDINEYSASVSMRPFPDAVILIGEASSDMKPVMEKLDYAMPKDTVIVGDERSCFIYRSGNDSRNACGRRGNIEAVALVFAEDRDRVSGKIKFHVALSNGVSAVGAKYKTASVRTSSTDSSTWLTARREGQLEHLDGQTILHDIHELLENHIESPDLYIGVVKHRKFSIGVGKPMPRTCIAYHGVVGGDEEYLYVDGIGIKTGDNFQFYRSDPNSASASLAKVHDSLKNIKLEGNSKTNGDNIVDVFGGLIFACYGRGESFFGHVNVDSSPFLENFPGVPLAGTFCGGEMVRPCTTFLSESQEGSPISCCLHVYSTVYLVMSYTPL 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0838 532 SMART FIST_C_2 346 499 IPR019494 -
Lal17g0838 532 Pfam FIST C domain 405 497 IPR019494 -
Lal17g0838 532 PANTHER SKP2-LIKE, FIST C DOMAIN, FIST DOMAIN, N-TERMINAL ISOFORM 1 28 531 - -
Lal17g0838 532 MobiDBLite consensus disorder prediction 1 23 - -
Lal17g0838 532 SUPERFAMILY F-box domain 28 66 IPR036047 GO:0005515
Lal17g0838 532 PANTHER F-BOX ONLY PROTEIN 22 28 531 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0838 - - gmx:100815778 768.844