Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0836 ATGGCTGCAACCACCAACATTGGGTTACAATTTCATACAAATTATGTCAGCAACAATGTTTATAACAATATTGCATTTAAGGCACGTGATGTTTTGAAGATGGGTTTGTATTCTTCAGATCAAATTAACATTTTGAATAATAAAAGAAGATTTTTAAGTTCTAATGGTAGATCTCATATAGTGAACAAAATCAATGTAATGAAGGAGAATGTGATTGATTTGCATAATGAAAGTTTAGAAGATGCTATCTCTCGTGGAAGATTTGTGGAAGACAAATTTGTATTTAGGCAAAATTTTGTTGTTAGGTCTTATGAAATTGGGCCTGATAGAACAGTGACTATGGAAACACTCATGAGTTTTCTTCAGGAAACTGCTCTTAATCATGTTCCCAACCTTGGCACAGGAGGACCTGGGGATGATTTTGGAGTTACCCTGGAGATGAGCCTTCGGAAACTCATTTGGGTAGTTACTCGTATTCAGGTTCAAGTACATAGATACAGCAAATGGGGAGATGAAATTGAGGTTGATACTTGGTTCGATGTCGCTGGAAAGAACGGAATGCGAAGAGATTGGCTAGTTAGGGATCACAACACTAAAGAGATTATAGCAAGAGCAACAAGCATATGGGTAGTCATGAATAAAGAAACCAGAAGATTATCCAAGTTGCCTGATGAAGTTAAACAAGAGGGTCTGCCTTTCAACTTTAGTAGACGAGCCATTGCCATTGAAGAAACAGATACTGAAAAGATAGAAAAGCTCACTGATGACACTGCTGACGGAATTCGATCTGGAATGGCTCCAAGGTGGAACGACATGGATGCTAACCTGCATGTTAACAATGTGAAATACATTGGATGGATGTTGGAGAGTGTGCCAAAAGAAGTGTTGAAAGAGTATAACATGTCAAGCATGACTTTGGAGTATCGTCGTGAATGTACCGAATCAGATTTGTTGGAATCAATGACTAGTCCAGCAGAGAAGGTCACTGGCGACACCAACACTAGTTCAAGCATACCAAAATCCAACCTACAGTATTCACACCTGCTTCGCCTGCAGGACAATAAAGGAGAGATACTCCGAGCTAGAACTCAATGGCATCTAAAGCAAAAGCGGAACTGA 1119 0.3932 MAATTNIGLQFHTNYVSNNVYNNIAFKARDVLKMGLYSSDQINILNNKRRFLSSNGRSHIVNKINVMKENVIDLHNESLEDAISRGRFVEDKFVFRQNFVVRSYEIGPDRTVTMETLMSFLQETALNHVPNLGTGGPGDDFGVTLEMSLRKLIWVVTRIQVQVHRYSKWGDEIEVDTWFDVAGKNGMRRDWLVRDHNTKEIIARATSIWVVMNKETRRLSKLPDEVKQEGLPFNFSRRAIAIEETDTEKIEKLTDDTADGIRSGMAPRWNDMDANLHVNNVKYIGWMLESVPKEVLKEYNMSSMTLEYRRECTESDLLESMTSPAEKVTGDTNTSSSIPKSNLQYSHLLRLQDNKGEILRARTQWHLKQKRN 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0836 372 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 89 229 IPR029069 -
Lal17g0836 372 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 55 370 - -
Lal17g0836 372 MobiDBLite consensus disorder prediction 320 339 - -
Lal17g0836 372 Gene3D Hotdog Thioesterase 85 371 - -
Lal17g0836 372 CDD 4HBT 95 213 - -
Lal17g0836 372 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 265 365 IPR029069 -
Lal17g0836 372 Pfam Acyl-ACP thioesterase 94 366 IPR002864 GO:0006633|GO:0016790
Lal17g0836 372 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 55 370 IPR045023 GO:0006633|GO:0016297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0836 Lal-Chr17 6265091 6267687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0836 75 368 Acyl Lipid Metabolism Gene Families AT1G08510 52.041 5.98e-102 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0836 K10781 - gmx:100791281 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0836 17 6265091 6267687 Lal17g0836 17 6265091 6267687 ECH