Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0827 ATGCATCAGAGTCATTTAGTTTTCATCTTTGGGATTCTAGGAAATATTGCTTCTTTCGTGTGCTTTCTAGCACCACTACCAACGTTCTATAGAGTTTGTAAGAAGAAATCAACCGAAGGGTTCCAAGCGATTCCATATGTGGCTGCACTGTTCAGTGCAATGCTTTGGATTTTTTATGCCTATGTGAAAACTGGAGCAATTCTTCTTATCACCATAAATGCATTTGGTTGTGTGATAGAGACAATTTACCTTGCCATATATATCACTTACTGCCCCAAGAAAACTAGGATGAGAACATTGGGGATGATTCTGTTTTTCAACTTTGGGGGATGTTGTGCAATTGTCCTCTTAACTCACCTCCTTTCAAAAGGAGAAGGCCGTGTGAAGCTTCTTGGATGGATTTGCGTAGTATTCTCTACTAGTGTTTTTGCAGCACCTTTGAGCATTATTAGGGTGGTTATTCGCACCAAAAGTGTAGAGTTCCTTCCTTTTCCTCTTTCACTCCTCCTCACAATAAGCGCAGTTATGTGGTTGCTATACGGTGTTTCTCTAAAAGATATATACGTAACACTACCCAACATTGTGGGGTTATCTTTTGGAACTATTCAGATGATACTCTATGCAATATACAGAAACAACAAACCCTTAAAGGACCAGAAGCTCTCAGAACAACAAGGGGGTATCAATAATAAAAACGAAGCTACAATAACTACTGTGAATGAAGAGAAACAAGAAGAGGTGAACCCTCACAATAGAGATATAGAAATTGGAGAGAGAAAAGAAGAGAAGGAAGAAGTGCAACCTAACAAAAATCAAGACCAAACAGAACTCAACAACAACAACAACATAGGAGAGAGGGTTAATTGTGAAGTTTGA 876 0.3881 MHQSHLVFIFGILGNIASFVCFLAPLPTFYRVCKKKSTEGFQAIPYVAALFSAMLWIFYAYVKTGAILLITINAFGCVIETIYLAIYITYCPKKTRMRTLGMILFFNFGGCCAIVLLTHLLSKGEGRVKLLGWICVVFSTSVFAAPLSIIRVVIRTKSVEFLPFPLSLLLTISAVMWLLYGVSLKDIYVTLPNIVGLSFGTIQMILYAIYRNNKPLKDQKLSEQQGGINNKNEATITTVNEEKQEEVNPHNRDIEIGERKEEKEEVQPNKNQDQTELNNNNNIGERVNCEV 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0827 291 Pfam Sugar efflux transporter for intercellular exchange 9 94 IPR004316 GO:0016021
Lal17g0827 291 Pfam Sugar efflux transporter for intercellular exchange 130 214 IPR004316 GO:0016021
Lal17g0827 291 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 5 284 - -
Lal17g0827 291 Gene3D - 7 95 - -
Lal17g0827 291 Gene3D - 127 222 - -
Lal17g0827 291 PANTHER RAG1-ACTIVATING PROTEIN 1 5 284 - -
Lal17g0827 291 MobiDBLite consensus disorder prediction 271 291 - -
Lal17g0827 291 MobiDBLite consensus disorder prediction 242 291 - -
Lal17g0827 291 MobiDBLite consensus disorder prediction 242 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0827 Lal-Chr17 6136153 6138597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0827 8 282 Miscellaneous Gene Families AT5G50800 54.513 3.81e-97 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0827 K15382 - gmx:100791106 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1436 14 15569722 15571509 Lal17g0827 17 6136153 6138597 ECH
Lal17g0827 17 6136153 6138597 Lal17g0827 17 6136153 6138597 ECH
Lal14g1436 14 15569722 15571509 Lal17g0827 17 6136153 6138597 PCT
Lal17g0827 17 6136153 6138597 Lal14g1436 14 15569722 15571509 PCT