Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0820 ATGGATCGGAGGAGAACTGAGAGTCCAATCTACACGCGGCAATGGAGCGGTGGTTCCAGCAGCACCGGTTCATCGTCGCCGGTGATGTCACCGGCTCATCCTCAGTCGCGGCTTGGTCCTACATCCACCGTCAAGCGAACTCAAAACATTGCTGCTAAAGCCGCCGCGCAGCGTCTCGCTCGCGTCATGGCTTCTCATACAGCTGTCGCCAACGACGGGGAGGAGGATGACGATGACGACGATCTCGATTTCCGGTTTAGTGCTCGGCAACCTAACGCTCTTTCTTCTTTTTCTAATAATGGAAGTAGTTTTAGGAGTACTAGTTCTGGTTCCGCTGTTCCTTCGATTTCGCTCTTGAGACCTAACCGATCTCCTTCTCCTGCGTTAGGTCAGAACATTATAGAGCGTACTCCTTCCTTCCGTTCAACATCAGCTGGAAGACCAGCGGTTTCGGTTCGATCAGCACAGGTGGTGCCACCTAGAAAATCCACAATTCGAACACCTATGGTTGTACCTCCAATTGATCCTCCTACCAATCGAGGTAGGGAGAAAAGGTTTCCATCAGATATCAATGTCAGGCAAATTAACTCAAAAGACACAGGAAATCAACACGAAGCTTCTGCACTCCGTGATGAACTCGACATGCTAGAAGAAGAGAATGGGATTATGTTAGAAAAGCTAAGGATTGCAGAAGAAAAACGACAAGAAGTGGAGGCAAGAGTTAGGGAACTTGAGAAACAGGTGGCGAATCTTGGAGAGGGTGTATCCTTAGAAGCTAAACTTCTTAGCAGGAAGGAAGCTGCTGTGCGTCAAAGAGAGGCTGCTCTCAAGGCTGCACAGCAATCACAGGATAGAATAGATGACGAAGTTGTGGCCCTTCGTGTGGAAATTCAGAACCTAAAAGATGATGCTGCGGCAGCTGTAGAACAACAGCAAGAAGCTGAAGCTGATGCAAAGGCTCTTCGCACTATGACACAGAGGATGATTTTGACCCAAGAAGAAATGGAGGAAGTTGTCCTGAAGAGATGCTGGCTTTCCCGCTACTGGGGATTTGCTCTAAAACATGATATAGCACAATCCAAGCATGAATGTTGGTCTTCTCTAGCTCCTCTTCCATTTGAAGTGGTCATCGCTGCTGGGCAAAAGGCTAAGGAGGAATCTTGGAATAGAAAGCATGGACCAGATGCTGATGATCCAGATAGAAGCAAACTTGTTTGTGATTTGAATGATCTCACTGGGGAAGGAAACATTGAGAGTATGCTTTCGGTTGAGATGGGTTTGAGGGAACTTGCATCTTTGAAGGTTGAGGATGCTGTTGTGCTTGCATTAGCCCAACATAGACGCACAAATTTGGTTCGTCAGTCGATATTAGATTCCGAACAACCTGACTATGCGAAATATTCAGAAGCACTTGAGTTAAGTGAAGAGGAAGCAGAAGATGTTCATTTCAAAGAGGCATGGCTAATTTATTTCTGGAGAAGAGCTTTATTTCATGATGTGGAAGAAGATATTGCAGAAGAGCGACTTCAGTTTTGGATTGCTCGCAGTGGGCAGAGACCAACTTCACACAATGCTGTTGATGTTGAGCGAGGCTTGTCCGAGTTGAGGAAGCTGGGTATAGAACAGCAACTTTGGGAAGCATCTCGCAAGGGAAATGATCAACCTCCAAGTTCTGCAGTCACTAATCATAAGTCTGCCACTGACTCTGATGCCTCATCGTGA 1722 0.4681 MDRRRTESPIYTRQWSGGSSSTGSSSPVMSPAHPQSRLGPTSTVKRTQNIAAKAAAQRLARVMASHTAVANDGEEDDDDDDLDFRFSARQPNALSSFSNNGSSFRSTSSGSAVPSISLLRPNRSPSPALGQNIIERTPSFRSTSAGRPAVSVRSAQVVPPRKSTIRTPMVVPPIDPPTNRGREKRFPSDINVRQINSKDTGNQHEASALRDELDMLEEENGIMLEKLRIAEEKRQEVEARVRELEKQVANLGEGVSLEAKLLSRKEAAVRQREAALKAAQQSQDRIDDEVVALRVEIQNLKDDAAAAVEQQQEAEADAKALRTMTQRMILTQEEMEEVVLKRCWLSRYWGFALKHDIAQSKHECWSSLAPLPFEVVIAAGQKAKEESWNRKHGPDADDPDRSKLVCDLNDLTGEGNIESMLSVEMGLRELASLKVEDAVVLALAQHRRTNLVRQSILDSEQPDYAKYSEALELSEEEAEDVHFKEAWLIYFWRRALFHDVEEDIAEERLQFWIARSGQRPTSHNAVDVERGLSELRKLGIEQQLWEASRKGNDQPPSSAVTNHKSATDSDASS 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0820 573 Coils Coil 283 317 - -
Lal17g0820 573 PANTHER MYOSIN 1 554 - -
Lal17g0820 573 MobiDBLite consensus disorder prediction 546 573 - -
Lal17g0820 573 MobiDBLite consensus disorder prediction 1 52 - -
Lal17g0820 573 PANTHER FAS-BINDING FACTOR-LIKE PROTEIN 1 554 IPR040321 GO:0000911
Lal17g0820 573 MobiDBLite consensus disorder prediction 10 50 - -
Lal17g0820 573 MobiDBLite consensus disorder prediction 166 185 - -
Lal17g0820 573 Coils Coil 206 254 - -
Lal17g0820 573 MobiDBLite consensus disorder prediction 547 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0820 Lal-Chr17 6036428 6053812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0820 1 549 EF-hand Containing Proteins AT5G13260 54.594 7.82e-171 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0820 - - gmx:100805810 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0820 17 6036428 6053812 Lal17g0820 17 6036428 6053812 ECH