Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0810 ATGGCCCTGCTTCTGCAGGCACCAACAAAGTCTCCACTTTCATTAGTCTCTACTAACAATGTTGGTCTGAGACGACCCTTCAACCGTTTTCCAATGAAATCATCATCTTTCATTGGATCACTTAGCCTTTTACTTCATCCTAACCAATATCATCTTATTACTTCTGCATCTCCTAGGATTTCCATGCGTGTTGCTTCCAAGGATTCCTATATCTGTCGTGATTGCGGGTACATTTATAATGAGAGGACTGCCTTTGAGAAATTGCCTGATAAATACTTCTGCCCTGTTTGTGGTGCTCCAAAACGAAGGTTCAGGCCTTATACACCAGCTGTTTCAAAAAATGCTAATGCTACAGATGTTAGAAAGGCAAGAAAAGCAGAAATCCAGAAAGATGAAGCAATTGGGAAGGCACTTCCTATTGCAATTGCTGTGGGAGTTGTAGTGCTTGTTGGATTATACTTCTACCTCAACAGTCAATTTTAG 483 0.4099 MALLLQAPTKSPLSLVSTNNVGLRRPFNRFPMKSSSFIGSLSLLLHPNQYHLITSASPRISMRVASKDSYICRDCGYIYNERTAFEKLPDKYFCPVCGAPKRRFRPYTPAVSKNANATDVRKARKAEIQKDEAIGKALPIAIAVGVVVLVGLYFYLNSQF 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0810 160 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 3 160 - -
Lal17g0810 160 Pfam Rubredoxin 70 104 IPR024935 GO:0005506
Lal17g0810 160 Gene3D - 68 107 - -
Lal17g0810 160 CDD rubredoxin 70 107 IPR024935 GO:0005506
Lal17g0810 160 ProSiteProfiles Rubredoxin-like domain profile. 67 107 IPR024934 GO:0005506
Lal17g0810 160 SUPERFAMILY Rubredoxin-like 67 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0810 Lal-Chr17 5924295 5926475 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0810 - - gmx:100500575 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0810 17 5924295 5926475 Lal17g0810 17 5924295 5926475 ECH
Lal17g0810 17 5924295 5926475 Lal4g0675 4 5248276 5258338 LSH
Lal14g1389 14 15205980 15206496 Lal17g0810 17 5924295 5926475 PCT
Lal7g0833 7 14960801 14961184 Lal17g0810 17 5924295 5926475 PCT
Lal19g0957 19 13551342 13551764 Lal17g0810 17 5924295 5926475 PCT